RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
PKNOX1-206ENST00000480179 PHF20L1A8MW92 1017 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 MEIS2O14770 477 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 LBX1P52954 281 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 HSP90AA4PQ58FG1 418 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 IGSF22Q8N9C0 903 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 LRWD1Q9UFC0 647 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
PKNOX1-206ENST00000480179 MARCH6O60337 910 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 GRM1Q13255 1194 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 AP3B2Q13367 1082 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 GJA10Q969M2 543 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 UIMC1Q96RL1 719 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 P2RX7Q99572 595 aaKnown RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 MMTAG2Q9BU76 263 aaKnown RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 POTEMA6NI47 508 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 TRAF5O00463 557 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 SERPINC1P01008 464 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 STX17P56962 302 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 LRMPQ12912 555 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 CAPNS2Q96L46 248 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 RMND1Q9NWS8 449 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 NFE2L3Q9Y4A8 694 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
PKNOX1-206ENST00000480179 DOCK1Q14185 1865 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 H7C1D1 291 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 OPLAHO14841 1288 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 HOXA13P31271 388 aaPredicted RBP16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 TMC6Q7Z403 805 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 FILIP1Q7Z7B0 1213 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 MED15Q96RN5 788 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 RAB34Q9BZG1 259 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
PKNOX1-206ENST00000480179 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 ERCC5P28715 1186 aaPredicted RBP16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 ARHGAP4P98171 946 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 CST9Q5W186 159 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 ZC3H15Q8WU90 426 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 HAS1Q92839 578 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 CDK5RAP3Q96JB5 506 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 MAGEF1Q9HAY2 307 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
PKNOX1-206ENST00000480179 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 USP11P51784 963 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 UBASH3AP57075 661 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 GRB10Q13322 594 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 DHX8Q14562 1220 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 ARID5BQ14865 1188 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 COBLO75128 1261 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 TRAF1Q13077 416 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 CT47A1Q5JQC4 288 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 PNMA5Q96PV4 448 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 GDAQ9Y2T3 454 aa16.36■□□□□ 0.21
PKNOX1-206ENST00000480179 CTNND1O60716 968 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 PLA2G6O60733 806 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 FOSP01100 380 aaPredicted RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 INPP5BP32019 993 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 SREBF1P36956 1147 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 DGKZQ13574 1117 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 PDIA5Q14554 519 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 PRAMEF18Q5VWM3 479 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 KRT79Q5XKE5 535 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 APOBEC3FQ8IUX4 373 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 SAMSN1Q9NSI8 373 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-206ENST00000480179 CYP3A7-CYP3A51PA0A087WV96 503 aa16.34■□□□□ 0.21
PKNOX1-206ENST00000480179 KLRC4O43908 158 aa16.34■□□□□ 0.21
PKNOX1-206ENST00000480179 CFBP00751 764 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms