RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 E9PSI1 815 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 GRM6O15303 877 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 AMHP03971 560 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 HOXB3P14651 431 aaPredicted RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 CTNNB1P35222 781 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 WDR63Q8IWG1 891 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 DYNLL2Q96FJ2 89 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 CLEC1BQ9P126 229 aa14.39□□□□□ -0.11
USP11-208ENST00000480104 TRIP12Q14669 1992 aaPredicted RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 MYO5AQ9Y4I1 1855 aaKnown RBP14.39□□□□□ -0.11
USP11-208ENST00000480104 NAV1Q8NEY1 1877 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 FRYQ5TBA9 3013 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 USP17L21D6R901 530 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 ZBED4O75132 1171 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 CHMP4BP1P59074 171 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
USP11-208ENST00000480104 SLC38A10Q9HBR0 1119 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
USP11-208ENST00000480104 COG6Q9Y2V7 657 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 CTDP1Q9Y5B0 961 aaPredicted RBP14.38□□□□□ -0.11
USP11-208ENST00000480104 SPEGQ15772 3267 aa14.38□□□□□ -0.11
USP11-208ENST00000480104 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 MAST4O15021 2626 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 IGSF3O75054 1194 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 LMNAP02545 664 aaKnown RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 CKBP12277 381 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 RBL2Q08999 1139 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 COASYQ13057 564 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 MBTPS1Q14703 1052 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 RSPO4Q2I0M5 234 aaPredicted RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 GDF6Q6KF10 455 aaPredicted RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 PRPF38AQ8NAV1 312 aaKnown RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 LMAN2LQ9H0V9 348 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
USP11-208ENST00000480104 SALL2Q9Y467 1007 aaPredicted RBP14.37□□□□□ -0.11
USP11-208ENST00000480104 LGR5O75473 907 aa14.36□□□□□ -0.11
USP11-208ENST00000480104 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
USP11-208ENST00000480104 KIFC2Q96AC6 838 aa14.36□□□□□ -0.11
USP11-208ENST00000480104 C11orf84Q9BUA3 381 aaPredicted RBP14.36□□□□□ -0.11
USP11-208ENST00000480104 WDR11Q9BZH6 1224 aa14.36□□□□□ -0.11
USP11-208ENST00000480104 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
USP11-208ENST00000480104 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
USP11-208ENST00000480104 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
USP11-208ENST00000480104 KREMEN2Q8NCW0 462 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 HINFPQ9BQA5 517 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 DBNDD2Q9BQY9 259 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
USP11-208ENST00000480104 UPP2O95045 317 aa14.34□□□□□ -0.11
USP11-208ENST00000480104 CCDC158Q5M9N0 1113 aa14.34□□□□□ -0.11
USP11-208ENST00000480104 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
USP11-208ENST00000480104 RNF146Q9NTX7 359 aa14.34□□□□□ -0.11
USP11-208ENST00000480104 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
USP11-208ENST00000480104 GCN1Q92616 2671 aaKnown RBP14.33□□□□□ -0.12
USP11-208ENST00000480104 KPNA6O60684 536 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 BRD1O95696 1058 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 GLP2RO95838 553 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 NDUFB10O96000 172 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 MMP1P03956 469 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 OAZ1P54368 228 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 ANGPT1Q15389 498 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 ADGRD2Q7Z7M1 963 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 DBF4BQ8NFT6 615 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 SDR42E1Q8WUS8 393 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
USP11-208ENST00000480104 RAD50Q92878 1312 aa14.33□□□□□ -0.12
USP11-208ENST00000480104 RALGAPA2Q2PPJ7 1873 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 A6NJR5 290 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 RB1P06400 928 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
USP11-208ENST00000480104 SP100P23497 879 aaPredicted RBP14.32□□□□□ -0.12
USP11-208ENST00000480104 BMPR1AP36894 532 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 CAMK1Q14012 370 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 ZNF618Q5T7W0 954 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 CYP2W1Q8TAV3 490 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 SUSD6Q92537 303 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 WNT8BQ93098 351 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 TOP1MTQ969P6 601 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 CHAMP1Q96JM3 812 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
USP11-208ENST00000480104 SEMA4AQ9H3S1 761 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 SMOC2Q9H3U7 446 aa14.32□□□□□ -0.12
USP11-208ENST00000480104 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
USP11-208ENST00000480104 ASH1LQ9NR48 2969 aaKnown RBP14.31□□□□□ -0.12
USP11-208ENST00000480104 ARP10275 920 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 CDK8P49336 464 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms