RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 TECP42680 631 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 TNNT3P45378 269 aaPredicted RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 ZBED6P86452 979 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 LRRC63Q05C16 580 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ZNF543Q08ER8 600 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 SMC1AQ14683 1233 aaKnown RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 ZSCAN26Q16670 478 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 KRT79Q5XKE5 535 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 CUL5Q93034 780 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 EPN1Q9Y6I3 576 aaPredicted RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 KDM3AQ9Y4C1 1321 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 TRIM49BA6NDI0 452 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ERLIN1O75477 346 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 GTF2IP78347 998 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 GOLGA5Q8TBA6 731 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 HNRNPLLQ8WVV9 542 aaKnown RBP9.45□□□□□ -0.9
USP30-206ENST00000479219 EXOC4Q96A65 974 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 ERGIC2Q96RQ1 377 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
USP30-206ENST00000479219 TTC26A0AVF1 554 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 PES1O00541 588 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 SEC31AO94979 1220 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 NPR1P16066 1061 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 TRIM21P19474 475 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 MTIF2P46199 727 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 GUF1Q8N442 669 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 LARP4BQ92615 738 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 RPGRIP1Q96KN7 1286 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 CNOT6LQ96LI5 555 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 DUSP9Q99956 384 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 TSGA10Q9BZW7 698 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 NT5C3AQ9H0P0 336 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 GBP3Q9H0R5 595 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 AFF2P51816 1311 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 PSMD14O00487 310 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 KRT86O43790 486 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 MCM3P25205 808 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 PMS1P54277 932 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 TBC1D8BQ0IIM8 1120 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 CENPPQ6IPU0 288 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 POTEDQ86YR6 584 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 PROM2Q8N271 834 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 TSG101Q99816 390 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 MMTAG2Q9BU76 263 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 MRIQ9BWK5 157 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
USP30-206ENST00000479219 VAT1LQ9HCJ6 419 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 MYH7BA7E2Y1 1941 aa9.44□□□□□ -0.9
USP30-206ENST00000479219 SASH3O75995 380 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 TXKP42681 527 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 FKBP1AP62942 108 aaKnown RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 DDR1Q08345 913 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 DPP8Q6V1X1 898 aaPredicted RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 MSL3Q8N5Y2 521 aaKnown RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 ARFGEF1Q9Y6D6 1849 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 CTAGE15A4D2H0 777 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 B4DLN1 442 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 EIF3CLB5ME19 914 aaKnown RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 ZBTB5O15062 677 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 CTAGE8P0CG41 777 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 PDE6BP35913 854 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 ARHGAP25P42331 645 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 PICALMQ13492 652 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 ANKRD40Q6AI12 368 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 CTAGE6Q86UF2 777 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 CTAGE4Q8IX94 777 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 SLC35F6Q8N357 371 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 RAD54LQ92698 747 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 PLIN2Q99541 437 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 EIF3CQ99613 913 aaKnown RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 EDEM3Q9BZQ6 932 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 TTYH3Q9C0H2 523 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 UBA5Q9GZZ9 404 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 BMP2KQ9NSY1 1161 aaPredicted RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 USP40Q9NVE5 1235 aa9.43□□□□□ -0.9
USP30-206ENST00000479219 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
USP30-206ENST00000479219 ANO9A1A5B4 782 aa9.42□□□□□ -0.9
USP30-206ENST00000479219 MYO1CO00159 1063 aa9.42□□□□□ -0.9
USP30-206ENST00000479219 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
USP30-206ENST00000479219 AKR1B1P15121 316 aa9.42□□□□□ -0.9
USP30-206ENST00000479219 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
USP30-206ENST00000479219 CKAP4Q07065 602 aaKnown RBP9.42□□□□□ -0.9
USP30-206ENST00000479219 STK4Q13043 487 aa9.42□□□□□ -0.9
USP30-206ENST00000479219 GRB10Q13322 594 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms