RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 MED14OSP0DP75 135 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 IFNGR1P15260 489 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 GLDCP23378 1020 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 KIR3DS1Q14943 382 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
GPNMB-210ENST00000478451 NUP43Q8NFH3 380 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 FCRL3Q96P31 734 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-210ENST00000478451 JMJD8Q96S16 334 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 IMPACTQ9P2X3 320 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 CGGBP1Q9UFW8 167 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-210ENST00000478451 MRVI1Q9Y6F6 885 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 PZPP20742 1482 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 RALGAPBQ86X10 1494 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 BCORL1Q5H9F3 1711 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 SPATA31E1Q6ZUB1 1445 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 TCAF2A6NFQ2 919 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 ETV2O00321 342 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-210ENST00000478451 SEMA7AO75326 666 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 PRKCAP17252 672 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 DNAJA1P31689 397 aaKnown RBP5.67□□□□□ -1.5
GPNMB-210ENST00000478451 ARL4AP40617 200 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 LAPTM5Q13571 262 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 HLA-DQA1Q5Y7H0 255 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 KCNN1Q92952 543 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 PRKRIP1Q9H875 184 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-210ENST00000478451 CD320Q9NPF0 282 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 SUSD2Q9UGT4 822 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 ACSL6Q9UKU0 697 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 SUGT1Q9Y2Z0 365 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 UNC13BO14795 1591 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 ABCA8O94911 1581 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 MAST1Q9Y2H9 1570 aa5.67□□□□□ -1.5
GPNMB-210ENST00000478451 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 UHRF1BP1Q6BDS2 1440 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 SMG6Q86US8 1419 aaKnown RBP5.66□□□□□ -1.5
GPNMB-210ENST00000478451 CDC42BPBQ9Y5S2 1711 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 GPATCH8Q9UKJ3 1502 aaKnown RBP5.66□□□□□ -1.5
GPNMB-210ENST00000478451 ANKRD34BA5PLL1 514 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 STXBP3O00186 592 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 HRKO00198 91 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
GPNMB-210ENST00000478451 SDHBP21912 280 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 CYP4F8P98187 520 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 ATG14Q6ZNE5 492 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 JAMLQ86YT9 394 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 SLC43A3Q8NBI5 491 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 PTCHD1Q96NR3 888 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
GPNMB-210ENST00000478451 MCMBPQ9BTE3 642 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
GPNMB-210ENST00000478451 PLXNC1O60486 1568 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 TEX51A0A1B0GUA7 166 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQ27 194 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQ64 194 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQC6 194 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQD8 194 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 AURKAO14965 403 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 VAMP4O75379 141 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 FGRP09769 529 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 NAT2P11245 290 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 AMPD2Q01433 879 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 GRB10Q13322 594 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 NCAPHQ15003 741 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 TMEM132EQ6IEE7 984 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 RCSD1Q6JBY9 416 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 ARHGEF39Q8N4T4 335 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 RCC1LQ96I51 464 aaKnown RBP5.65□□□□□ -1.5
GPNMB-210ENST00000478451 TNFRSF12AQ9NP84 129 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 APEX2Q9UBZ4 518 aa5.65□□□□□ -1.5
GPNMB-210ENST00000478451 CFDP1Q9UEE9 299 aaPredicted RBP5.65□□□□□ -1.5
GPNMB-210ENST00000478451 USP47Q96K76 1375 aa5.65□□□□□ -1.51
GPNMB-210ENST00000478451 ZMYM4Q5VZL5 1548 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ZNF608Q9ULD9 1512 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 IQGAP3Q86VI3 1631 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 NPIPB6E9PJ23 425 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 TBC1D8O95759 1140 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 MPOP05164 745 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 MSL3P1P0C860 447 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ZNF143P52747 638 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 YBX1P67809 324 aaKnown RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 DLG4P78352 724 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ARID5AQ03989 594 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 KCNA10Q16322 511 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 DPY19L1Q2PZI1 675 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 EEF1DP3Q658K8 133 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 LARP1BQ659C4 914 aaKnown RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 OLFML2BQ68BL8 750 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 MCF2L2Q86YR7 1114 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ZNF513Q8N8E2 541 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 SREK1Q8WXA9 508 aaKnown RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 RELTQ969Z4 430 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 TANGO6Q9C0B7 1094 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 PRKAG3Q9UGI9 489 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 SMG5Q9UPR3 1016 aaKnown RBP5.64□□□□□ -1.51
GPNMB-210ENST00000478451 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 BACE2Q9Y5Z0 518 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 KIF7Q2M1P5 1343 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms