RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GPLD1P80108 840 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TRDNQ13061 729 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 HSP90AA2PQ14568 343 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 CAMK4Q16566 473 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 STX1AQ16623 288 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF827Q17R98 1081 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 DNTTIP2Q5QJE6 756 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TTLL5Q6EMB2 1281 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 LDHAL6AQ6ZMR3 332 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 PTF1AQ7RTS3 328 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 BRAPQ7Z569 592 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 MTERF4Q7Z6M4 381 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 CCAR1Q8IX12 1150 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 CKAP2LQ8IYA6 745 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 STAG2Q8N3U4 1231 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 LARGE2Q8N3Y3 721 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TTLL11Q8NHH1 800 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 SCG3Q8WXD2 468 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 USP28Q96RU2 1077 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 C2orf49Q9BVC5 232 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TTC12Q9H892 705 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 SRA1Q9HD15 236 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TFCP2L1Q9NZI6 479 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 ASAP1Q9ULH1 1129 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 NAP1L2Q9ULW6 460 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 DLEC1Q9Y238 1755 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 MROH5Q6ZUA9 1318 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 MYH14Q7Z406 1995 aaKnown RBP5.71□□□□□ -1.49
SF3B6-202ENST00000478050 CCDC88AQ3V6T2 1871 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 A0A0G2JLW4 131 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 KLF18A0A0U1RQI7 1052 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 A0A1W2PQ27 194 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 A0A1W2PQ64 194 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 A0A1W2PQD8 194 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 GOLGA8BA8MQT2 603 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 GOLGA6L19H0YKK7 550 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 CPLX1O14810 134 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 FOXP2O15409 715 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 AP5Z1O43299 807 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 SASH3O75995 380 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 CDKL5O76039 1030 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 PDE8BO95263 885 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 YEATS4O95619 227 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 WNT11O96014 354 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 SLC5A1P13866 664 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 GPTP24298 496 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 MCAMP43121 646 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ZNF165P49910 485 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ZNF75DP51815 510 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 CLDN10P78369 228 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 FAM160A1Q05DH4 1040 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 PTK7Q13308 1070 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 STK38Q15208 465 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ALX1Q15699 326 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 HLFQ16534 295 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 RTN1Q16799 776 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 HABP4Q5JVS0 413 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 PHLDB3Q6NSJ2 640 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 SARM1Q6SZW1 724 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 PLA2G4DQ86XP0 818 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ANKMY2Q8IV38 441 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 OGFOD1Q8N543 542 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 IL22RA1Q8N6P7 574 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 VGLL2Q8N8G2 317 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 FSIP1Q8NA03 581 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 MYRIPQ8NFW9 859 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 KCNG4Q8TDN1 519 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 MRPS27Q92552 414 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 C8orf76Q96K31 380 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 TMEM87BQ96K49 555 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 PUS7LQ9H0K6 701 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 GREM2Q9H772 168 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 NCOA5Q9HCD5 579 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ANO10Q9NW15 660 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ZFATQ9P243 1243 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 ORC3Q9UBD5 711 aaPredicted RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 TRMT112Q9UI30 125 aaKnown RBP5.71□□□□□ -1.5
SF3B6-202ENST00000478050 SBF2Q86WG5 1849 aa5.71□□□□□ -1.5
SF3B6-202ENST00000478050 LAMB1P07942 1786 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 MAST2Q6P0Q8 1798 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 RTL9Q8NET4 1388 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 SCN7AQ01118 1682 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 EXOC5O00471 708 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 SH2B2O14492 632 aaPredicted RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 C21orf2O43822 256 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 NEMFO60524 1076 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 FDPSP14324 419 aaKnown RBP5.7□□□□□ -1.5
SF3B6-202ENST00000478050 FGFR2P21802 821 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ATP2B4P23634 1241 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ME1P48163 572 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 IDH3AP50213 366 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 ANTXR2P58335 489 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 HAND2P61296 217 aa5.7□□□□□ -1.5
SF3B6-202ENST00000478050 GUCY1B3Q02153 619 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms