RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
MINDY3-206ENST00000477891 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 MASTLQ96GX5 879 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 CNOT6LQ96LI5 555 aaKnown RBP11.77□□□□□ -0.53
MINDY3-206ENST00000477891 ZDHHC15Q96MV8 337 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
MINDY3-206ENST00000477891 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.53
MINDY3-206ENST00000477891 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.53
MINDY3-206ENST00000477891 NDUFA10O95299 355 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
MINDY3-206ENST00000477891 PDE6BP35913 854 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 TEX35Q5T0J7 233 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 GPATCH4Q5T3I0 446 aaKnown RBP11.76□□□□□ -0.53
MINDY3-206ENST00000477891 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 CENPPQ6IPU0 288 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 SNX29Q8TEQ0 813 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
MINDY3-206ENST00000477891 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 DDX25Q9UHL0 483 aaKnown RBP11.76□□□□□ -0.53
MINDY3-206ENST00000477891 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 BICDL2A1A5D9 508 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 TMEM266Q2M3C6 531 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 CNNM4Q6P4Q7 775 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 DDX12PQ92771 950 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 CUL5Q93034 780 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 ST7Q9NRC1 585 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 MYO3BQ8WXR4 1341 aa11.76□□□□□ -0.53
MINDY3-206ENST00000477891 SEC31AO94979 1220 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 ZRANB2O95218 330 aaKnown RBP eCLIP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 APBA3O96018 575 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 IDEP14735 1019 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 MRPL12P52815 198 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 SNAP25P60880 206 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 KRT79Q5XKE5 535 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 RAD54LQ92698 747 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 NOC4LQ9BVI4 516 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 EHD4Q9H223 541 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 PVALEFA0A1B0GWK0 134 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 ERCC3P19447 782 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 SLC1A4P43007 532 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 SEPT2Q15019 361 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 LRRC41Q15345 812 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 UNC13DQ70J99 1090 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 PARD6BQ9BYG5 372 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
MINDY3-206ENST00000477891 CDC23Q9UJX2 597 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
MINDY3-206ENST00000477891 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
MINDY3-206ENST00000477891 CERKLQ49MI3 558 aaPredicted RBP11.74□□□□□ -0.53
MINDY3-206ENST00000477891 TMEM119Q4V9L6 283 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 DACT2Q5SW24 774 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
MINDY3-206ENST00000477891 MKL1Q969V6 931 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
MINDY3-206ENST00000477891 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 GUCA1BQ9UMX6 200 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 PLSCR1O15162 318 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 HERVK_113P62684 666 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 JAG1P78504 1218 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 EHHADHQ08426 723 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
MINDY3-206ENST00000477891 MEA1Q16626 185 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 STRIP1Q5VSL9 837 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
MINDY3-206ENST00000477891 MYH7BA7E2Y1 1941 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 QSER1Q2KHR3 1735 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 EPHB6O15197 1021 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 ECE2O60344 883 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 TMCO3Q6UWJ1 677 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 SRGAP1Q7Z6B7 1085 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 RABGGTAQ92696 567 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 DNAJC19Q96DA6 116 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
MINDY3-206ENST00000477891 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
MINDY3-206ENST00000477891 IDI2Q9BXS1 227 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms