RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.8□□□□□ -1
SPTLC1-205ENST00000477888 LRRC8DQ7L1W4 858 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 RPAINQ86UA6 219 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 DHX38Q92620 1227 aaKnown RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 SAMD11Q96NU1 681 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 PURBQ96QR8 312 aaKnown RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 CRBNQ96SW2 442 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 FEM1BQ9UK73 627 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 NOD1Q9Y239 953 aa8.8□□□□□ -1
SPTLC1-205ENST00000477888 COL4A4P53420 1690 aaPredicted RBP8.8□□□□□ -1
SPTLC1-205ENST00000477888 MED19A0JLT2 244 aaPredicted RBP8.79□□□□□ -1
SPTLC1-205ENST00000477888 SURF6O75683 361 aaKnown RBP8.79□□□□□ -1
SPTLC1-205ENST00000477888 RGS20O76081 388 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 FDX1P10109 184 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 CKBP12277 381 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 SLFN5Q08AF3 891 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 HYAL1Q12794 435 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 TRAF7Q6Q0C0 670 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 SESTD1Q86VW0 696 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 TMEM192Q8IY95 271 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 CCDC155Q8N6L0 562 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 TET1Q8NFU7 2136 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 SSH3Q8TE77 659 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 ARHGAP45Q92619 1136 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 MKL1Q969V6 931 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 ARMT1Q9H993 441 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 RNF146Q9NTX7 359 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 CYP39A1Q9NYL5 469 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 NOP58Q9Y2X3 529 aaKnown RBP8.79□□□□□ -1
SPTLC1-205ENST00000477888 COL11A1P12107 1806 aaPredicted RBP8.79□□□□□ -1
SPTLC1-205ENST00000477888 PARP14Q460N5 1801 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 VPS13AQ96RL7 3174 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 CACNA1BQ00975 2339 aa8.79□□□□□ -1
SPTLC1-205ENST00000477888 EPG5Q9HCE0 2579 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 SCN5AQ14524 2016 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 TBX10O75333 385 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 EYA4O95677 639 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 OS9Q13438 667 aaPredicted RBP8.78□□□□□ -1
SPTLC1-205ENST00000477888 MBTPS1Q14703 1052 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 TTF1Q15361 905 aaPredicted RBP8.78□□□□□ -1
SPTLC1-205ENST00000477888 TKFCQ3LXA3 575 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 BRDTQ58F21 947 aaPredicted RBP8.78□□□□□ -1
SPTLC1-205ENST00000477888 MUM1L1Q5H9M0 696 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 GDF6Q6KF10 455 aaPredicted RBP8.78□□□□□ -1
SPTLC1-205ENST00000477888 CTR9Q6PD62 1173 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 FBXO11Q86XK2 927 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 RPAP2Q8IXW5 612 aaPredicted RBP8.78□□□□□ -1
SPTLC1-205ENST00000477888 OR6J1Q8NGC5 347 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 CD207Q9UJ71 328 aa8.78□□□□□ -1
SPTLC1-205ENST00000477888 FAM186AA6NE01 2351 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 DNAH14Q0VDD8 3507 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 IGKV6D-41A0A0C4DH26 115 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 GALR2O43603 387 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 RASA1P20936 1047 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 ATP8B2P98198 1209 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 ADAM15Q13444 863 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 TRMT2AQ8IZ69 625 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 MYOCDQ8IZQ8 938 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 LRRC47Q8N1G4 583 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 KAT2BQ92831 832 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 TOP1MTQ969P6 601 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 MSLNLQ96KJ4 702 aa8.77□□□□□ -1.01
SPTLC1-205ENST00000477888 GVINP1Q7Z2Y8 2422 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 COL4A6Q14031 1691 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 LOC102724159A0A0B4J2E5 919 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 C5orf67F2Z3F1 127 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 NKRFO15226 690 aaKnown RBP eCLIP8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 LINC01565O15544 149 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 LGR5O75473 907 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 BCAR3O75815 825 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 MBD4O95243 580 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 AMHP03971 560 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 LINC00271P0C7V0 271 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 BMP3P12645 472 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 ALAS1P13196 640 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 ALDH5A1P51649 535 aaPredicted RBP8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 PWP2Q15269 919 aaKnown RBP8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 HS6ST3Q8IZP7 471 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 ADSSL1Q8N142 457 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 GMCL1P1Q8NEA9 526 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 DBF4BQ8NFT6 615 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 COPS5Q92905 334 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 CLEC1BQ9P126 229 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 SYNPO2Q9UMS6 1093 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 RAD50Q92878 1312 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 CACNA1GO43497 2377 aa8.76□□□□□ -1.01
SPTLC1-205ENST00000477888 TMEM232C9JQI7 657 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 GRM6O15303 877 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 PDGFBP01127 241 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 RB1P06400 928 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms