RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SCFD2Q8WU76 684 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 NAPBQ9H115 298 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 IL17RBQ9NRM6 502 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 EDNRBP24530 442 aa23.95■■□□□ 1.42
PDLIM1-202ENST00000477757 CCDC96Q2M329 555 aa23.95■■□□□ 1.42
PDLIM1-202ENST00000477757 DCAF4Q8WV16 495 aa23.95■■□□□ 1.42
PDLIM1-202ENST00000477757 GPATCH3Q96I76 525 aa23.95■■□□□ 1.42
PDLIM1-202ENST00000477757 CTAGE1Q96RT6 745 aa23.95■■□□□ 1.42
PDLIM1-202ENST00000477757 SIP14410 1827 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 PTPDC1A2A3K4 754 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 TSPY2A6NKD2 308 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 NMT2O60551 498 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 NOVP48745 357 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 DEFB103AP81534 67 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 PDE4DQ08499 809 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 LEXMQ3ZCV2 418 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 TSHZ3Q63HK5 1081 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 BTNL9Q6UXG8 535 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 TMCO2Q7Z6W1 182 aaPredicted RBP23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 FAM178BQ8IXR5 827 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 ZBED2Q9BTP6 218 aa23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 CHMP4BQ9H444 224 aaKnown RBP23.94■■□□□ 1.42
PDLIM1-202ENST00000477757 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 ERVK-21P61565 698 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 GPNMBQ14956 572 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 PTGISQ16647 500 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 ALYREFQ86V81 257 aaKnown RBP23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 GJD3Q8N144 294 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 CLEC4DQ8WXI8 215 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 COPS5Q92905 334 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 MPHOSPH6Q99547 160 aaKnown RBP23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 SUGCTQ9HAC7 445 aa23.93■■□□□ 1.42
PDLIM1-202ENST00000477757 GJB5O95377 273 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 SELPP16109 830 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 CALML3P27482 149 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 SLC16A2P36021 539 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 RBL2Q08999 1139 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 SYDE2Q5VT97 1194 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 CNKSR3Q6P9H4 555 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 LRRC8DQ7L1W4 858 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 SESTD1Q86VW0 696 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 TGS1Q96RS0 853 aaKnown RBP23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 SEC62Q99442 399 aaKnown RBP23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 RAD9AQ99638 391 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 MTUS1Q9ULD2 1270 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 MTMR7Q9Y216 660 aa23.92■■□□□ 1.42
PDLIM1-202ENST00000477757 PARNO95453 639 aaKnown RBP23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 CXCL10P02778 98 aa23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 TTBK2Q6IQ55 1244 aa23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 RNF207Q6ZRF8 634 aa23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 DNERQ8NFT8 737 aa23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 DHX38Q92620 1227 aaKnown RBP23.91■■□□□ 1.42
PDLIM1-202ENST00000477757 LINC01553A4QN01 128 aa23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 TXNP10599 105 aaKnown RBP23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 KCNA5P22460 613 aa23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 GDF6Q6KF10 455 aaPredicted RBP23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 PNMA2Q9UL42 364 aa23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 TRIP12Q14669 1992 aaPredicted RBP23.9■■□□□ 1.42
PDLIM1-202ENST00000477757 FOXP2O15409 715 aa23.89■■□□□ 1.41
PDLIM1-202ENST00000477757 ARIH2O95376 493 aa23.89■■□□□ 1.41
PDLIM1-202ENST00000477757 CHMP4BP1P59074 171 aa23.89■■□□□ 1.41
PDLIM1-202ENST00000477757 RPS6P62753 249 aaKnown RBP23.89■■□□□ 1.41
PDLIM1-202ENST00000477757 ABHD14A-ACY1A0A1B0GW23 586 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 NBNO60934 754 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 EFCAB14O75071 495 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 ALADP13716 330 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 SSTR3P32745 418 aaPredicted RBP23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 CTDSPL2Q05D32 466 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 TCTN1Q2MV58 587 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 INCENPQ9NQS7 918 aa23.88■■□□□ 1.41
PDLIM1-202ENST00000477757 WDR19Q8NEZ3 1342 aa23.87■■□□□ 1.41
PDLIM1-202ENST00000477757 WDFY4Q6ZS81 3184 aa23.87■■□□□ 1.41
PDLIM1-202ENST00000477757 IL9P15248 144 aa23.87■■□□□ 1.41
PDLIM1-202ENST00000477757 ZMYM1Q5SVZ6 1142 aa23.87■■□□□ 1.41
PDLIM1-202ENST00000477757 PTCRAQ6ISU1 281 aaPredicted RBP23.87■■□□□ 1.41
PDLIM1-202ENST00000477757 B4DLN1 442 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 ORC4O43929 436 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 RANBP6O60518 1105 aaKnown RBP23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 MMP3P08254 477 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 CKBP12277 381 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 MRPL12P52815 198 aaKnown RBP23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 CCDC62Q6P9F0 684 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 AFG1LQ8WV93 481 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 KAT2BQ92831 832 aa23.86■■□□□ 1.41
PDLIM1-202ENST00000477757 FRMPD2Q68DX3 1309 aaPredicted RBP23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 MRE11P49959 708 aa23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 PUS10Q3MIT2 529 aaKnown RBP23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 GPCPD1Q9NPB8 672 aa23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 GTF2IRD1Q9UHL9 959 aa23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 ANAPC4Q9UJX5 808 aa23.85■■□□□ 1.41
PDLIM1-202ENST00000477757 GRXCR2A6NFK2 248 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 TOP1P11387 765 aaKnown RBP23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 ARHGAP1Q07960 439 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 IKBKEQ14164 716 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 FBXO22Q8NEZ5 403 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 UIMC1Q96RL1 719 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 TMEM47Q9BQJ4 181 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 FSD1Q9BTV5 496 aa23.84■■□□□ 1.41
PDLIM1-202ENST00000477757 TTC41PQ6P2S7 1318 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms