RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KIAA1217Q5T5P2 1943 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 KLF18A0A0U1RQI7 1052 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 RBM47A0AV96 593 aaKnown RBP20.44■□□□□ 0.86
PTPN7-209ENST00000477554 CST5P28325 142 aaPredicted RBP20.44■□□□□ 0.86
PTPN7-209ENST00000477554 MAGEA10P43363 369 aaPredicted RBP20.44■□□□□ 0.86
PTPN7-209ENST00000477554 GHRHRQ02643 423 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 FUT2Q10981 343 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 GNASQ5JWF2 1037 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 Q6ZUG5 572 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 DNERQ8NFT8 737 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 LARP6Q9BRS8 491 aaKnown RBP20.44■□□□□ 0.86
PTPN7-209ENST00000477554 PXMP2Q9NR77 195 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 TRIM43BA6NCK2 446 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 RGS20O76081 388 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 SEC24BO95487 1268 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 ITGB8P26012 769 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 MDM2Q00987 491 aaPredicted RBP20.43■□□□□ 0.86
PTPN7-209ENST00000477554 TLE2Q04725 743 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 IQSEC1Q6DN90 963 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 FCHSD1Q86WN1 690 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 MCF2L2Q86YR7 1114 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 TMTC2Q8N394 836 aa20.43■□□□□ 0.86
PTPN7-209ENST00000477554 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
PTPN7-209ENST00000477554 TRIM43Q96BQ3 446 aaPredicted RBP20.43■□□□□ 0.86
PTPN7-209ENST00000477554 CNTNAP5Q8WYK1 1306 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
PTPN7-209ENST00000477554 KIF5BP33176 963 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 NKX3-2P78367 333 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 KRT32Q14532 448 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 DUSP28Q4G0W2 176 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 USP17L6PQ6QN14 398 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 CXCL17Q6UXB2 119 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 SEPT14Q6ZU15 432 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 BRF1Q92994 677 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 GDF15Q99988 308 aa20.42■□□□□ 0.86
PTPN7-209ENST00000477554 GRIN2DO15399 1336 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 SORBS3O60504 671 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 PQBP1O60828 265 aaKnown RBP20.41■□□□□ 0.86
PTPN7-209ENST00000477554 RPS6KB1P23443 525 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 PSMC6P62333 389 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 FSCN1Q16658 493 aaKnown RBP20.41■□□□□ 0.86
PTPN7-209ENST00000477554 LY6KQ17RY6 165 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 ARHGEF16Q5VV41 709 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 NSUN6Q8TEA1 469 aaKnown RBP20.41■□□□□ 0.86
PTPN7-209ENST00000477554 RRP36Q96EU6 259 aaKnown RBP20.41■□□□□ 0.86
PTPN7-209ENST00000477554 TSEN34Q9BSV6 310 aaKnown RBP20.41■□□□□ 0.86
PTPN7-209ENST00000477554 STARD7Q9NQZ5 370 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 PDLIM7Q9NR12 457 aa20.41■□□□□ 0.86
PTPN7-209ENST00000477554 ZBTB43O43298 467 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 NR3C2P08235 984 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 MYCLP12524 364 aaPredicted RBP20.4■□□□□ 0.86
PTPN7-209ENST00000477554 ADD1P35611 737 aaKnown RBP20.4■□□□□ 0.86
PTPN7-209ENST00000477554 CCDC62Q6P9F0 684 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 BLOC1S2Q6QNY1 142 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 PDCD2LQ9BRP1 358 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 BCAS3Q9H6U6 928 aa20.4■□□□□ 0.86
PTPN7-209ENST00000477554 PRDM5Q9NQX1 630 aaPredicted RBP20.4■□□□□ 0.86
PTPN7-209ENST00000477554 NAP1L2Q9ULW6 460 aaPredicted RBP20.4■□□□□ 0.86
PTPN7-209ENST00000477554 GOLGA8AA7E2F4 631 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 GOLGA8BA8MQT2 603 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 MEIS2O14770 477 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 ADAMTS3O15072 1205 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 DTNBO60941 627 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 CALM1P0DP23 149 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 CALM2P0DP24 149 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 CALM3P0DP25 149 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 PGM5Q15124 567 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 RTN1Q16799 776 aa20.39■□□□□ 0.85
PTPN7-209ENST00000477554 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
PTPN7-209ENST00000477554 LOC102724159A0A0B4J2E5 919 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 MOXD2PA6NHM9 499 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 GCOM1H8Y6P7 765 aaPredicted RBP20.38■□□□□ 0.85
PTPN7-209ENST00000477554 POLR2MP0CAP2 368 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
PTPN7-209ENST00000477554 SMARCA1P28370 1054 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 TOB2Q14106 344 aaPredicted RBP20.38■□□□□ 0.85
PTPN7-209ENST00000477554 PWP2Q15269 919 aaKnown RBP20.38■□□□□ 0.85
PTPN7-209ENST00000477554 UBE2SQ16763 222 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 C1orf53Q5VUE5 145 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 WWC2Q6AWC2 1192 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 OR6J1Q8NGC5 347 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 AP5M1Q9H0R1 490 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 DOCK5Q9H7D0 1870 aa20.38■□□□□ 0.85
PTPN7-209ENST00000477554 GNAQP50148 359 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 CDK7P50613 346 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 FAAP100Q0VG06 881 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 VTI1AQ96AJ9 217 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 LZTS2Q9BRK4 669 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 AGXT2Q9BYV1 514 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 SPC25Q9HBM1 224 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 TELO2Q9Y4R8 837 aa20.37■□□□□ 0.85
PTPN7-209ENST00000477554 SOX1O00570 391 aaPredicted RBP20.36■□□□□ 0.85
PTPN7-209ENST00000477554 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
PTPN7-209ENST00000477554 FXR1P51114 621 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN7-209ENST00000477554 MRPS9P82933 396 aaKnown RBP20.36■□□□□ 0.85
PTPN7-209ENST00000477554 SP2Q02086 613 aa20.36■□□□□ 0.85
PTPN7-209ENST00000477554 STXBP2Q15833 593 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms