RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 BSDC1Q9NW68 430 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 TAF1P21675 1872 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 MYH10P35580 1976 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 TRIM21P19474 475 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 BAG6P46379 1132 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 CHRNDQ07001 517 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 KCNB1Q14721 858 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 IRF2BP1Q8IU81 584 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 ADSSL1Q8N142 457 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 ATP6V1G3Q96LB4 118 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 CCT8L2Q96SF2 557 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 A0A1B0GUA9 196 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 PPP1R12AO14974 1030 aaPredicted RBP16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 RPS8P62241 208 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 TTC38Q5R3I4 469 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 NAPBQ9H115 298 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 MYH1P12882 1939 aa16.91■□□□□ 0.3
CLSTN1-205ENST00000477264 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 MCAMP43121 646 aa16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 EIF1ADQ8N9N8 165 aaKnown RBP16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 STRBPQ96SI9 672 aaKnown RBP16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC189A1A4V9 331 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 PSMA7O14818 248 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 PPP1R2P41236 205 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 PRCPP42785 496 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 ATP1A2P50993 1020 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC96Q2M329 555 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 PARP9Q8IXQ6 854 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 FANCBQ8NB91 859 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 SGSM3Q96HU1 749 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC43Q96MW1 224 aaKnown RBP16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 STK32BQ9NY57 414 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 ZNF532Q9HCE3 1301 aa16.89■□□□□ 0.3
CLSTN1-205ENST00000477264 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 PNPLA7Q6ZV29 1317 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 LCA5LO95447 670 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 PDE6AP16499 860 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 FGFR2P21802 821 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 CCDC42Q96M95 316 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-205ENST00000477264 GOLGA6L10A6NI86 522 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 SH2D3CQ8N5H7 860 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 CCDC114Q96M63 670 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 TCRBV5S4A2TA0A5A2 114 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 ZNF233A6NK53 670 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 PES1O00541 588 aaKnown RBP16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 UQCRFS1P1P0C7P4 283 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 ARL6IP4Q66PJ3 421 aaKnown RBP16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 CYB5D1Q6P9G0 228 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 CYFIP2Q96F07 1278 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 ERGIC2Q96RQ1 377 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 TFR2Q9UP52 801 aa16.88■□□□□ 0.29
CLSTN1-205ENST00000477264 COL4A1P02462 1669 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 GRID2IPA4D2P6 1211 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 PJA2O43164 708 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 GNAT2P19087 354 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 IFT88Q13099 833 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 ITGB3BPQ13352 177 aaPredicted RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 CFAP221Q4G0U5 840 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 CAPN6Q9Y6Q1 641 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 BICDL2A1A5D9 508 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 KRT14P02533 472 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 IRX1P78414 480 aaPredicted RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 LACTB2Q53H82 288 aaPredicted RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 TNFRSF25Q93038 417 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
CLSTN1-205ENST00000477264 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms