RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 TBC1D5Q92609 795 aa20.92■□□□□ 0.94
ABCB1-204ENST00000476862 MTG1Q9BT17 334 aaPredicted RBP20.92■□□□□ 0.94
ABCB1-204ENST00000476862 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
ABCB1-204ENST00000476862 SUPT20HL2P0C7V6 817 aa20.91■□□□□ 0.94
ABCB1-204ENST00000476862 PTGS1P23219 599 aa20.91■□□□□ 0.94
ABCB1-204ENST00000476862 KIF5BP33176 963 aa20.91■□□□□ 0.94
ABCB1-204ENST00000476862 TMEM63BQ5T3F8 832 aa20.91■□□□□ 0.94
ABCB1-204ENST00000476862 FAM109BQ6ICB4 259 aaPredicted RBP20.91■□□□□ 0.94
ABCB1-204ENST00000476862 ANO2Q9NQ90 1003 aa20.91■□□□□ 0.94
ABCB1-204ENST00000476862 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
ABCB1-204ENST00000476862 CCDC69A6NI79 296 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 EIF2AK2P19525 551 aaKnown RBP20.9■□□□□ 0.94
ABCB1-204ENST00000476862 MCM5P33992 734 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 PSMC6P62333 389 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 SMAD3P84022 425 aaKnown RBP20.9■□□□□ 0.94
ABCB1-204ENST00000476862 FAM47CQ5HY64 1035 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 SLC43A3Q8NBI5 491 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 ESYT1Q9BSJ8 1104 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 HIPK3Q9H422 1215 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 MTMR10Q9NXD2 777 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 SZT2Q5T011 3432 aa20.9■□□□□ 0.94
ABCB1-204ENST00000476862 GH1P01241 217 aa20.89■□□□□ 0.93
ABCB1-204ENST00000476862 CD4P01730 458 aa20.89■□□□□ 0.93
ABCB1-204ENST00000476862 RNF20Q5VTR2 975 aa20.89■□□□□ 0.93
ABCB1-204ENST00000476862 PIGSQ96S52 555 aa20.89■□□□□ 0.93
ABCB1-204ENST00000476862 MTA3Q9BTC8 594 aa20.89■□□□□ 0.93
ABCB1-204ENST00000476862 MTIF3Q9H2K0 278 aaKnown RBP20.89■□□□□ 0.93
ABCB1-204ENST00000476862 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 GCOM1H8Y6P7 765 aaPredicted RBP20.88■□□□□ 0.93
ABCB1-204ENST00000476862 PRC1O43663 620 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 EIF3JO75822 258 aaKnown RBP20.88■□□□□ 0.93
ABCB1-204ENST00000476862 NR3C2P08235 984 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 POLR2MP0CAP2 368 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 MYCLP12524 364 aaPredicted RBP20.88■□□□□ 0.93
ABCB1-204ENST00000476862 GNAQP50148 359 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 CHMP4BP1P59074 171 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 PURAQ00577 322 aaKnown RBP20.88■□□□□ 0.93
ABCB1-204ENST00000476862 PSRC1Q6PGN9 363 aaPredicted RBP20.88■□□□□ 0.93
ABCB1-204ENST00000476862 STOX1Q6ZVD7 989 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 COPS5Q92905 334 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 MTMR8Q96EF0 704 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 TMEM87BQ96K49 555 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 RIOX1Q9H6W3 641 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 PXMP2Q9NR77 195 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 NOD1Q9Y239 953 aa20.88■□□□□ 0.93
ABCB1-204ENST00000476862 KIAA1217Q5T5P2 1943 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 CSF2RAP15509 400 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 CYP2C18P33260 490 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 EPHB4P54760 987 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 TROAPQ12815 778 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 BMP2KLQ5H9B9 411 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 MB21D2Q8IYB1 491 aaPredicted RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 RPUSD2Q8IZ73 545 aaKnown RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 IGDCC4Q8TDY8 1250 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 PIBF1Q8WXW3 757 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 LSG1Q9H089 658 aaKnown RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 TRPV6Q9H1D0 765 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 COL20A1Q9P218 1284 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 SEC63Q9UGP8 760 aaKnown RBP20.87■□□□□ 0.93
ABCB1-204ENST00000476862 STXBP5LQ9Y2K9 1186 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 MRVI1Q9Y6F6 885 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 TAF6LQ9Y6J9 622 aa20.87■□□□□ 0.93
ABCB1-204ENST00000476862 A6NJR5 290 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 SLC27A2O14975 620 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 B4GALT4O60513 344 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 DDAH1O94760 285 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 CALM1P0DP23 149 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 CALM2P0DP24 149 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 CALM3P0DP25 149 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
ABCB1-204ENST00000476862 HSD17B4P51659 736 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 LY6KQ17RY6 165 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 KCNV1Q6PIU1 500 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 ZNF654Q8IZM8 581 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 RRP36Q96EU6 259 aaKnown RBP20.86■□□□□ 0.93
ABCB1-204ENST00000476862 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.86■□□□□ 0.93
ABCB1-204ENST00000476862 LZTS2Q9BRK4 669 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 ALDH8A1Q9H2A2 487 aaPredicted RBP20.86■□□□□ 0.93
ABCB1-204ENST00000476862 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
ABCB1-204ENST00000476862 LAMA3Q16787 3333 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 GRIN2DO15399 1336 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 MYH7BA7E2Y1 1941 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
ABCB1-204ENST00000476862 CCL23P55773 120 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 ANTXR2P58335 489 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 NBPF20Q3BBV1 942 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 CUL5Q93034 780 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
ABCB1-204ENST00000476862 ARIH2O95376 493 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 FGBP02675 491 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 ACRP10323 421 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 CCND2P30279 289 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms