RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 PDGFCQ9NRA1 345 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 USP15Q9Y4E8 981 aaPredicted RBP7.79□□□□□ -1.16
CLDN4-205ENST00000476494 CNOT1A5YKK6 2376 aaKnown RBP7.79□□□□□ -1.16
CLDN4-205ENST00000476494 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
CLDN4-205ENST00000476494 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 CYSRT1A8MQ03 144 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 GRM6O15303 877 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 ZEB2O60315 1214 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 BRD1O95696 1058 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 GLP2RO95838 553 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 PLCG2P16885 1265 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
CLDN4-205ENST00000476494 COPB2P35606 906 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 MCAMP43121 646 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 PLCD1P51178 756 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 BFSP2Q13515 415 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 CWF19L1Q69YN2 538 aaKnown RBP7.78□□□□□ -1.16
CLDN4-205ENST00000476494 NFRKBQ6P4R8 1299 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
CLDN4-205ENST00000476494 DDX11Q96FC9 970 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 RPGRIP1Q96KN7 1286 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 VCPKMTQ9H867 229 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 CABP5Q9NP86 173 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 PPP1R9AQ9ULJ8 1098 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 TMX2Q9Y320 296 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 NAV1Q8NEY1 1877 aa7.78□□□□□ -1.16
CLDN4-205ENST00000476494 DCDC2BA2VCK2 349 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 ATP2A1O14983 1001 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 WDR46O15213 610 aaKnown RBP7.77□□□□□ -1.17
CLDN4-205ENST00000476494 BAG3O95817 575 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 IGHDP01880 384 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 NPR3P17342 541 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 CNTN2Q02246 1040 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 EVX2Q03828 476 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 MTX1Q13505 466 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 COL9A3Q14050 684 aaPredicted RBP7.77□□□□□ -1.17
CLDN4-205ENST00000476494 IQSEC1Q6DN90 963 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 CEP85Q6P2H3 762 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 SMC5Q8IY18 1101 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 CCDC105Q8IYK2 499 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 FAM133AQ8N9E0 248 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 SUMF1Q8NBK3 374 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 AFAP1L1Q8TED9 768 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 RUBCNQ92622 972 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 HAUS7Q99871 368 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 AP5M1Q9H0R1 490 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 LMAN2LQ9H0V9 348 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 SMOC2Q9H3U7 446 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 IGFLR1Q9H665 355 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 INCENPQ9NQS7 918 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 RAI14Q9P0K7 980 aa7.77□□□□□ -1.17
CLDN4-205ENST00000476494 DDX49Q9Y6V7 483 aaKnown RBP7.77□□□□□ -1.17
CLDN4-205ENST00000476494 EFCAB14O75071 495 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 SELPP16109 830 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
CLDN4-205ENST00000476494 DYNLL1P63167 89 aaKnown RBP7.76□□□□□ -1.17
CLDN4-205ENST00000476494 PTPN11Q06124 597 aaPredicted RBP7.76□□□□□ -1.17
CLDN4-205ENST00000476494 IKBKEQ14164 716 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 HSP90AB4PQ58FF6 505 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 UBALD2Q8IYN6 164 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 EFHBQ8N7U6 833 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 KREMEN2Q8NCW0 462 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 CYP2W1Q8TAV3 490 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 CAGE1Q8TC20 777 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 KCNG4Q8TDN1 519 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 TOP1MTQ969P6 601 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 CHAMP1Q96JM3 812 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 TEX13BQ9BXU2 312 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 DCTPP1Q9H773 170 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 R4GN57 208 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 LCTP09848 1927 aa7.76□□□□□ -1.17
CLDN4-205ENST00000476494 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 PARNO95453 639 aaKnown RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 RB1P06400 928 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 CKBP12277 381 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 AOC1P19801 751 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 TGM1P22735 817 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 BMPR1AP36894 532 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 IL15P40933 162 aaPredicted RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 NAA16Q6N069 864 aaPredicted RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 NOL8Q76FK4 1167 aaKnown RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 LRRC8DQ7L1W4 858 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 ADGRD2Q7Z7M1 963 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 SIRT2Q8IXJ6 389 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 DTWD2Q8NBA8 298 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 MTG1Q9BT17 334 aaPredicted RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 C1orf115Q9H7X2 142 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 POLR3EQ9NVU0 708 aa7.75□□□□□ -1.17
CLDN4-205ENST00000476494 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 HELZ2Q9BYK8 2649 aaKnown RBP7.75□□□□□ -1.17
CLDN4-205ENST00000476494 LOC400499M0QZD8 3231 aa7.74□□□□□ -1.17
CLDN4-205ENST00000476494 RAB11FIP3O75154 756 aa7.74□□□□□ -1.17
CLDN4-205ENST00000476494 ZIC2O95409 532 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms