RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PYGBP11216 843 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 CUL1Q13616 776 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 C1QTNF12Q5T7M4 302 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF658Q5TYW1 1059 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-206ENST00000476391 NUGGCQ68CJ6 796 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ERICH1Q86X53 443 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 IRF2BP1Q8IU81 584 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 LMNTD2Q8IXW0 634 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 PSMB7Q99436 277 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 SUDS3Q9H7L9 328 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-206ENST00000476391 MLXIPQ9HAP2 919 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 NOVA2Q9UNW9 492 aaKnown RBP15.23■□□□□ 0.03
HDAC1-206ENST00000476391 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF213O14771 459 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 FOXP2O15409 715 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 COBLO75128 1261 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 FLOT1O75955 427 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 LCA5LO95447 670 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 SSRP1Q08945 709 aaKnown RBP15.22■□□□□ 0.03
HDAC1-206ENST00000476391 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 PPP1R15BQ5SWA1 713 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 IQCDQ96DY2 449 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 VPS54Q9P1Q0 977 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 LRRC42Q9Y546 428 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 ZBTB43O43298 467 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 WFS1O76024 890 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 MYBP10242 640 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 CTDSPL2Q05D32 466 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 DYNC1I2Q13409 638 aaKnown RBP15.22■□□□□ 0.03
HDAC1-206ENST00000476391 UAP1Q16222 522 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-206ENST00000476391 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 SAMD15Q9P1V8 674 aa15.22■□□□□ 0.03
HDAC1-206ENST00000476391 A0A0G2JS52 829 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 KCNQ3O43525 872 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 CTNND1O60716 968 aaKnown RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 MAGOHP61326 146 aaKnown RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 KCNJ2P63252 427 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 ATP11AP98196 1134 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 APBB1IPQ7Z5R6 666 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 GBP7Q8N8V2 638 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
HDAC1-206ENST00000476391 TRIM4Q9C037 500 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 THAP9Q9H5L6 903 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 C2CD2Q9Y426 696 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 TECPR2O15040 1411 aa15.21■□□□□ 0.03
HDAC1-206ENST00000476391 ZSCAN9O15535 394 aaPredicted RBP15.21■□□□□ 0.02
HDAC1-206ENST00000476391 PJA2O43164 708 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 FAM163BP0C2L3 166 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 HNRNPH3P31942 346 aaKnown RBP15.21■□□□□ 0.02
HDAC1-206ENST00000476391 NCALDP61601 193 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.02
HDAC1-206ENST00000476391 LMNB2Q03252 620 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 ANO7Q6IWH7 933 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 RNF10Q8N5U6 811 aaKnown RBP15.21■□□□□ 0.02
HDAC1-206ENST00000476391 TBC1D5Q92609 795 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.02
HDAC1-206ENST00000476391 FERMT2Q96AC1 680 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 KRT12Q99456 494 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 EXOC1Q9NV70 894 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 AGAP1Q9UPQ3 857 aa15.21■□□□□ 0.02
HDAC1-206ENST00000476391 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 E7ENQ6 273 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 RARAP10276 462 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 TNNC1P63316 161 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
HDAC1-206ENST00000476391 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 OR2W6PQ8NHA6 318 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
HDAC1-206ENST00000476391 SLC26A6Q9BXS9 759 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 PCDHGA4Q9Y5G9 962 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
HDAC1-206ENST00000476391 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 RXRAP19793 462 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 ECHS1P30084 290 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 GCKRQ14397 625 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 HLTFQ14527 1009 aaKnown RBP eCLIP15.19■□□□□ 0.029e-7■□□□□ 8.3
HDAC1-206ENST00000476391 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
HDAC1-206ENST00000476391 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-206ENST00000476391 XDHP47989 1333 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms