RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 TCP10L2B9ZVM9 353 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 GNAT1P11488 350 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 AMPD2Q01433 879 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 RASGRF1Q13972 1273 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 HLFQ16534 295 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 SLC17A8Q8NDX2 589 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 JAKMIP2Q96AA8 810 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 EIF3CLB5ME19 914 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 PRPF3O43395 683 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 RPN1P04843 607 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 MAGEA9P43362 315 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 CCDC122Q5T0U0 273 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 IFIT1BQ5T764 474 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 IQCEQ6IPM2 695 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 MMS19Q96T76 1030 aa9.4□□□□□ -0.9
MACF1-216ENST00000476350 EIF3CQ99613 913 aaKnown RBP9.4□□□□□ -0.9
MACF1-216ENST00000476350 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.4□□□□□ -0.91
MACF1-216ENST00000476350 ANKRD62A6NC57 917 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 TMOD1P28289 359 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 KRT9P35527 623 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 FCGRTP55899 365 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 HERVK_113P62684 666 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 NLRP10Q86W26 655 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 TNS4Q8IZW8 715 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 JPH2Q9BR39 696 aaPredicted RBP9.4□□□□□ -0.91
MACF1-216ENST00000476350 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 VAT1LQ9HCJ6 419 aa9.4□□□□□ -0.91
MACF1-216ENST00000476350 EPN1Q9Y6I3 576 aaPredicted RBP9.4□□□□□ -0.91
MACF1-216ENST00000476350 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.91
MACF1-216ENST00000476350 TNKSO95271 1327 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SLC8A3P57103 927 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 AMPD3Q01432 767 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SKIDA1Q1XH10 827 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 PIK3AP1Q6ZUJ8 805 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 MB21D1Q8N884 522 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 CALML4Q96GE6 196 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SAR1BQ9Y6B6 198 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 ANKRD36CQ5JPF3 1778 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 TARSL2A2RTX5 802 aaKnown RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 PDE4DQ08499 809 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 PKN1Q16512 942 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 GSPT2Q8IYD1 628 aaKnown RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 EXOC8Q8IYI6 725 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 PLSCR1O15162 318 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 GGCXP38435 758 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 GTF2A1P52655 376 aaPredicted RBP9.39□□□□□ -0.91
MACF1-216ENST00000476350 KRT83P78385 493 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 C2orf54Q08AI8 447 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 TSG101Q99816 390 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 MAPK8IP1Q9UQF2 711 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 DISP2A7MBM2 1401 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 LRP5O75197 1615 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 TOGARAM1Q9Y4F4 1720 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 PNPLA7Q6ZV29 1317 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 CETPP11597 493 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 GNA11P29992 359 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 STAT6P42226 847 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.912e-7■■■□□ 17.5
MACF1-216ENST00000476350 PTGDRQ13258 359 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 CRACR2AQ9BSW2 395 aa9.39□□□□□ -0.91
MACF1-216ENST00000476350 TBCAO75347 108 aaKnown RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 PARP1P09874 1014 aaKnown RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 INHBEP58166 350 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 PPM1EQ8WY54 764 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 WNT7AO00755 349 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 ATP2C1P98194 919 aaPredicted RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 SNAPC2Q13487 334 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 E2F4Q16254 413 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 FAM76AQ8TAV0 307 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 GDAP1L1Q96MZ0 367 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 DNAJC7Q99615 494 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 CHP1Q99653 195 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 LUC7L2Q9Y383 392 aaKnown RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 REXO2Q9Y3B8 237 aaKnown RBP9.38□□□□□ -0.91
MACF1-216ENST00000476350 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 ZMYND10O75800 440 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 SELENOOQ9BVL4 669 aa9.38□□□□□ -0.91
MACF1-216ENST00000476350 ADARB2Q9NS39 739 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms