RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 CXCL17Q6UXB2 119 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 TMTC3Q6ZXV5 915 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 GPKOWQ92917 476 aaPredicted RBP eCLIP15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 BRF1Q92994 677 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 PRDM5Q9NQX1 630 aaPredicted RBP15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 LRRC37A2A6NM11 1700 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 GCOM1H8Y6P7 765 aaPredicted RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 ZBTB43O43298 467 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 PQBP1O60828 265 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 PPFIA3O75145 1194 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 NR3C2P08235 984 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 POLR2MP0CAP2 368 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 CALM1P0DP23 149 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 CALM2P0DP24 149 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 CALM3P0DP25 149 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 RPS6KB1P23443 525 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 CDC27P30260 824 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 MAGEA10P43363 369 aaPredicted RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 GNAQP50148 359 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 TLE2Q04725 743 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 FSCN1Q16658 493 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 RTN1Q16799 776 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 DUSP28Q4G0W2 176 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 HABP4Q5JVS0 413 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 USP17L6PQ6QN14 398 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 TSEN34Q9BSV6 310 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 PXMP2Q9NR77 195 aa15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-206ENST00000475663 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 TXNP10599 105 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 PSMC6P62333 389 aa15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 PPP2R5BQ15173 497 aa15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 LY6KQ17RY6 165 aa15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-206ENST00000475663 CNTNAP5Q8WYK1 1306 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 MOXD2PA6NHM9 499 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 FUT2Q10981 343 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 SNX17Q15036 470 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 STXBP2Q15833 593 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 UBE2SQ16763 222 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 SCFD2Q8WU76 684 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 GLT1D1Q96MS3 346 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 MPHOSPH6Q99547 160 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-206ENST00000475663 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 TRIM43BA6NCK2 446 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 B4DLN1 442 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 MYL3P08590 195 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 PSMA5P28066 241 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 SMARCA1P28370 1054 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 MRPL12P52815 198 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 GHRHRQ02643 423 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 PGM5Q15124 567 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 TRIM43Q96BQ3 446 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 IWS1Q96ST2 819 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 GDF15Q99988 308 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 PRO3102Q9H379 93 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 PDLIM7Q9NR12 457 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 DNAH12Q6ZR08 3092 aa15.19■□□□□ 0.02
NIPAL3-206ENST00000475663 MEIS2O14770 477 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 DTNBO60941 627 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 RGS20O76081 388 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 SEC24BO95487 1268 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 ITGB8P26012 769 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 METAP2P50579 478 aaKnown RBP eCLIP15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 TTLL4Q14679 1199 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 CCDC62Q6P9F0 684 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
NIPAL3-206ENST00000475663 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 NKX3-2P78367 333 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 TRAF1Q13077 416 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 RUFY3Q7L099 469 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
NIPAL3-206ENST00000475663 PGBD1Q96JS3 809 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms