RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 APTXQ7Z2E3 356 aaKnown RBP17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 GJA10Q969M2 543 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 SCAF8Q9UPN6 1271 aaKnown RBP17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 PSMA7O14818 248 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 TPM2P07951 284 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 CYP3A7P24462 503 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 CD2APQ9Y5K6 639 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 ASNSP08243 561 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 ZNF280AP59817 542 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 MAP3K10Q02779 954 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 SPAG1Q07617 926 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 TBX2Q13207 712 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 MCM6Q14566 821 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 ADD3Q9UEY8 706 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-215ENST00000475470 H7C1D1 291 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 USP27XA6NNY8 438 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 CREBRFQ8IUR6 639 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 CCAR2Q8N163 923 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 RAD54LQ92698 747 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
RPUSD3-215ENST00000475470 OPLAHO14841 1288 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 TEX33O43247 280 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 EGFRP00533 1210 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 TNNT1P13805 278 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 PRR16Q569H4 304 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 CRYGNQ8WXF5 182 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 LRRC27Q9C0I9 530 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 LIMA1Q9UHB6 759 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 SREBF1P36956 1147 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 KRT31Q15323 416 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 TCP11X2Q5H9J9 407 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 CNNM4Q6P4Q7 775 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 FEZ1Q99689 392 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 KCND1Q9NSA2 647 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 GJA3Q9Y6H8 435 aa17.21■□□□□ 0.35
RPUSD3-215ENST00000475470 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 MYMKA6NI61 221 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 UQCRHP07919 91 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 CCT6AP40227 531 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 KCNJ6P48051 423 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 RASSF7Q02833 373 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 KDM3AQ9Y4C1 1321 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 PLA2G6O60733 806 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 PPP1R2P41236 205 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 STK4Q13043 487 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 TRIM47Q96LD4 638 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
RPUSD3-215ENST00000475470 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 N4BP3O15049 544 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 FCER1AP12319 257 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 Q4G0T1 1027 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 E4F1Q66K89 784 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 KCNK18Q7Z418 384 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms