RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
TM9SF3-204ENST00000475401 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 BLACEA4D250 179 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 ZNF503-AS2A6NEH8 195 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 MSL3P1P0C860 447 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 BCL6P41182 706 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 ERVFRD-1P60508 538 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 RAB3GAP1Q15042 981 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 MLANAQ16655 118 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 CEP68Q76N32 757 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 APPBP2Q92624 585 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 DIRC2Q96SL1 478 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 NSUN3Q9H649 340 aaKnown RBP8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 TNFRSF12AQ9NP84 129 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 DCP1AQ9NPI6 582 aaPredicted RBP8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 CLDND1Q9NY35 253 aa8.27□□□□□ -1.09
TM9SF3-204ENST00000475401 NUDT19A8MXV4 375 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 C22orf46C9J442 243 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 H7BY64 318 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 EFCAB14O75071 495 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 EFEMP2O95967 443 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 CYBBP04839 570 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 LCP1P13796 627 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 GPR85P60893 370 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 NTRK3Q16288 839 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 PAQR3Q6TCH7 311 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 MTDHQ86UE4 582 aaKnown RBP8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 TEX2Q8IWB9 1127 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 SYNPOQ8N3V7 929 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 KISS1RQ969F8 398 aaPredicted RBP8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 RNF114Q9Y508 228 aa8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 MRPL42Q9Y6G3 142 aaKnown RBP8.26□□□□□ -1.09
TM9SF3-204ENST00000475401 SRGAP3O43295 1099 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 KIZQ2M2Z5 673 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 MROH9Q5TGP6 573 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 WWC2Q6AWC2 1192 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 TMEM132EQ6IEE7 984 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 KCNT2Q6UVM3 1135 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 ZNF605Q86T29 641 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 DPF3Q92784 378 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 MTA3Q9BTC8 594 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 MRPL4Q9BYD3 311 aaKnown RBP8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 TMEM260Q9NX78 707 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 NDOR1Q9UHB4 597 aa8.25□□□□□ -1.09
TM9SF3-204ENST00000475401 ARNTLO00327 626 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 SDHBP21912 280 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 SQSTM1Q13501 440 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 TCEA2Q15560 299 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 LBX2Q6XYB7 198 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 PRR23BQ6ZRT6 265 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 DCP2Q8IU60 420 aaKnown RBP8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 NETO2Q8NC67 525 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 PEX11GQ96HA9 241 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 SFMBT1Q9UHJ3 866 aa8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
TM9SF3-204ENST00000475401 ESYT3A0FGR9 886 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 TLDC2A0PJX2 215 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 F8W031 263 aaPredicted RBP8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 HRKO00198 91 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 PPP1R11O60927 126 aaPredicted RBP8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 CDC45O75419 566 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 DGKIO75912 1065 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 DBHP09172 617 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 FPR2P25090 351 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 GUCY1A3Q02108 690 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 JAZF1Q86VZ6 243 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 PLEKHO2Q8TD55 490 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 FANCLQ9NW38 375 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 TRAF6Q9Y4K3 522 aa8.23□□□□□ -1.09
TM9SF3-204ENST00000475401 FAM47E-STBD1D6RA91 191 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 PLD2O14939 933 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 CLSTN1O94985 981 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 ASMTLO95671 621 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 NTRK1P04629 796 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 GLI4P10075 376 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 C16orf86Q6ZW13 317 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 EPB41L1Q9H4G0 881 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 ZNF552Q9H707 407 aaPredicted RBP8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 NCOA5Q9HCD5 579 aaKnown RBP8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 X6R8D5 127 aa8.22□□□□□ -1.09
TM9SF3-204ENST00000475401 MAFKO60675 156 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 MSCO60682 206 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 C6orf222P0C671 652 aaPredicted RBP8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 GRK2P25098 689 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 GRK3P35626 688 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 MAPKAPK2P49137 400 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 PAK1Q13153 545 aa8.21□□□□□ -1.1
TM9SF3-204ENST00000475401 SLC9A5Q14940 896 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms