RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SLC12A1Q13621 1099 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 MUM1Q2TAK8 710 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.5
VAPB-204ENST00000475243 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 NR2F2P24468 414 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 MARK3P27448 753 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.5
VAPB-204ENST00000475243 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 MCUQ8NE86 351 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 NRBP1Q9UHY1 535 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 POLR2BP30876 1174 aaKnown RBP11.96□□□□□ -0.5
VAPB-204ENST00000475243 YWHAGP61981 247 aaKnown RBP eCLIP11.96□□□□□ -0.5
VAPB-204ENST00000475243 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 ZBTB33Q86T24 672 aa11.96□□□□□ -0.5
VAPB-204ENST00000475243 ATP10AO60312 1499 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 CCDC38Q502W7 563 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 ZNF589Q86UQ0 364 aaPredicted RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 MAGOHBQ96A72 148 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 AMNQ9BXJ7 453 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 TYW1Q9NV66 732 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 ABCC4O15439 1325 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 ADGBQ8N7X0 1667 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 PRKAB2O43741 272 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 OPHN1O60890 802 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 H2AFZP0C0S5 128 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 CASP14P31944 242 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 RNASELQ05823 741 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 WHAMMP3Q1A5X7 153 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 H2AFVQ71UI9 128 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 PDZD4Q76G19 769 aaPredicted RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 KMT5AQ9NQR1 393 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 CAPN7Q9Y6W3 813 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 PZPP20742 1482 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 GOLGA8SH3BPF8 625 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 TFAMQ00059 246 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 JADE1Q6IE81 842 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 CNKSR1Q969H4 720 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 LTKP29376 864 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 CCNYQ8ND76 341 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 CLGNO14967 610 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 MCTP2Q6DN12 878 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 GALNT17Q6IS24 598 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 ANTXR1Q9H6X2 564 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 METTL14Q9HCE5 456 aaKnown RBP11.95□□□□□ -0.5
VAPB-204ENST00000475243 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 XDHP47989 1333 aa11.95□□□□□ -0.5
VAPB-204ENST00000475243 MYO1FO00160 1098 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 ABCF3Q9NUQ8 709 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 KIAA0232Q92628 1395 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 MLH3Q9UHC1 1453 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 IFNAR2P48551 515 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 MAP7Q14244 749 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 KCTD2Q14681 263 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 TBCKQ8TEA7 893 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 PARD3BQ8TEW8 1205 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 IQCDQ96DY2 449 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 LARP4BQ92615 738 aaKnown RBP11.94□□□□□ -0.5
VAPB-204ENST00000475243 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 CLTAP09496 248 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 SERPINB6P35237 376 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 STAT2P52630 851 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 MYOM2P54296 1465 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 PTPRTO14522 1441 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 MAPK4P31152 587 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 FOXD4Q12950 439 aaPredicted RBP11.94□□□□□ -0.5
VAPB-204ENST00000475243 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
VAPB-204ENST00000475243 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
VAPB-204ENST00000475243 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
VAPB-204ENST00000475243 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
VAPB-204ENST00000475243 INHBAP08476 426 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 ZSCAN26Q16670 478 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 AP5M1Q9H0R1 490 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 H0YCG3 227 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 MFAP3P55082 362 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 NR5A1Q13285 461 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 PDZD8Q8NEN9 1154 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 PCDHA5Q9Y5H7 936 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 RBL2Q08999 1139 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 DACT3Q96B18 629 aaPredicted RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 NT5C1BQ96P26 610 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms