RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 RBM47A0AV96 593 aaKnown RBP13.77□□□□□ -0.21
CLIP2-204ENST00000474962 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
CLIP2-204ENST00000474962 ZEB2O60315 1214 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 CABYRO75952 493 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 PARP1P09874 1014 aaKnown RBP13.77□□□□□ -0.21
CLIP2-204ENST00000474962 ACRP10323 421 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 CSF2RAP15509 400 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 CYP2C18P33260 490 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 FGD1P98174 961 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 PDE4DQ08499 809 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 SEC23AQ15436 765 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 CDC37Q16543 378 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-204ENST00000474962 COPS5Q92905 334 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 TAAR1Q96RJ0 339 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
CLIP2-204ENST00000474962 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 SEC24BO95487 1268 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 EDNRBP24530 442 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 BLOC1S2Q6QNY1 142 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-204ENST00000474962 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 VCANP13611 3396 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 LCTP09848 1927 aa13.76□□□□□ -0.21
CLIP2-204ENST00000474962 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 KLRF2D3W0D1 207 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 TLR3O15455 904 aaKnown RBP13.75□□□□□ -0.21
CLIP2-204ENST00000474962 PRC1O43663 620 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 B4GALT4O60513 344 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 MYL3P08590 195 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 ANAPC15P60006 121 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 WTAPQ15007 396 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 TMEM240Q5SV17 173 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 CHST3Q7LGC8 479 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 SYTL5Q8TDW5 730 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-204ENST00000474962 KCNB2Q92953 911 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-204ENST00000474962 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
CLIP2-204ENST00000474962 ABCB11O95342 1321 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 ARIH2O95376 493 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 CCL23P55773 120 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
CLIP2-204ENST00000474962 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
CLIP2-204ENST00000474962 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 GRXCR1A8MXD5 290 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 B4DLN1 442 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 DLL1O00548 723 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 CPT1AP50416 773 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 PPP2R5BQ15173 497 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 SLC35G1Q2M3R5 365 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 ADCK5Q3MIX3 580 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 RMDN3Q96TC7 470 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
CLIP2-204ENST00000474962 MRPL11Q9Y3B7 192 aaKnown RBP13.73□□□□□ -0.21
CLIP2-204ENST00000474962 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 A6NJR5 290 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 OPLAHO14841 1288 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 CFBP00751 764 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 CYP2C9P11712 490 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms