RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 SAMSN1Q9NSI8 373 aaKnown RBP23.69■■□□□ 1.38
SH3D21-202ENST00000474766 HDAC9Q9UKV0 1011 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 C1QTNF8P60827 252 aa23.68■■□□□ 1.38
SH3D21-202ENST00000474766 RBL2Q08999 1139 aa23.68■■□□□ 1.38
SH3D21-202ENST00000474766 HSP90AA4PQ58FG1 418 aa23.68■■□□□ 1.38
SH3D21-202ENST00000474766 SPATA1Q5VX52 437 aa23.68■■□□□ 1.38
SH3D21-202ENST00000474766 DIXDC1Q155Q3 683 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 IL17AQ16552 155 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 ARL6IP4Q66PJ3 421 aaKnown RBP23.67■■□□□ 1.38
SH3D21-202ENST00000474766 PACS2Q86VP3 889 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 TMTC1Q8IUR5 882 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 PYM1Q9BRP8 204 aaKnown RBP23.67■■□□□ 1.38
SH3D21-202ENST00000474766 PGAP2Q9UHJ9 254 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 LDHCP07864 332 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 CD44P16070 742 aaKnown RBP23.67■■□□□ 1.38
SH3D21-202ENST00000474766 GNAQP50148 359 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 BLIDQ8IZY5 108 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 SLC35F6Q8N357 371 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 C4orf32Q8N8J7 132 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 ZBED3Q96IU2 234 aaPredicted RBP23.67■■□□□ 1.38
SH3D21-202ENST00000474766 ADD3Q9UEY8 706 aaKnown RBP23.67■■□□□ 1.38
SH3D21-202ENST00000474766 MAD2L2Q9UI95 211 aa23.67■■□□□ 1.38
SH3D21-202ENST00000474766 WNT10BO00744 389 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 FSTL1Q12841 308 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 SLC4A8Q2Y0W8 1093 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 MAP9Q49MG5 647 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 FILIP1LQ4L180 1135 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 FOXR1Q6PIV2 292 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 SUGP1Q8IWZ8 645 aaKnown RBP23.66■■□□□ 1.38
SH3D21-202ENST00000474766 STAG2Q8N3U4 1231 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 PCDHA4Q9UN74 947 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 PPP1R3GB7ZBB8 358 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 M0R2N6 131 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 RHOXF2BP0C7M4 288 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 CASP1P29466 404 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 MMP14P50281 582 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 PDXDC2PQ6P474 469 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 CERS3Q8IU89 383 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 AMOTL1Q8IY63 956 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 ZC3H15Q8WU90 426 aaKnown RBP23.66■■□□□ 1.38
SH3D21-202ENST00000474766 RHOXF2Q9BQY4 288 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 FAM204AQ9H8W3 233 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 SUGCTQ9HAC7 445 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 MKNK2Q9HBH9 465 aa23.66■■□□□ 1.38
SH3D21-202ENST00000474766 MCM7P33993 719 aa23.65■■□□□ 1.38
SH3D21-202ENST00000474766 CDKAL1Q5VV42 579 aa23.65■■□□□ 1.38
SH3D21-202ENST00000474766 AFAP1L1Q8TED9 768 aa23.65■■□□□ 1.38
SH3D21-202ENST00000474766 NAV1Q8NEY1 1877 aa23.65■■□□□ 1.38
SH3D21-202ENST00000474766 AMPD2Q01433 879 aa23.64■■□□□ 1.38
SH3D21-202ENST00000474766 DNAJC21Q5F1R6 531 aaKnown RBP23.64■■□□□ 1.38
SH3D21-202ENST00000474766 CCDC148Q8NFR7 591 aa23.64■■□□□ 1.38
SH3D21-202ENST00000474766 TGFBRAP1Q8WUH2 860 aa23.64■■□□□ 1.38
SH3D21-202ENST00000474766 GGA3Q9NZ52 723 aa23.64■■□□□ 1.38
SH3D21-202ENST00000474766 LRRIQ3A6PVS8 624 aaPredicted RBP23.64■■□□□ 1.37
SH3D21-202ENST00000474766 TEX33O43247 280 aa23.64■■□□□ 1.37
SH3D21-202ENST00000474766 ITGBL1O95965 494 aaPredicted RBP23.64■■□□□ 1.37
SH3D21-202ENST00000474766 LONP1P36776 959 aaKnown RBP23.64■■□□□ 1.37
SH3D21-202ENST00000474766 SLC35G1Q2M3R5 365 aa23.64■■□□□ 1.37
SH3D21-202ENST00000474766 MTMR14Q8NCE2 650 aa23.64■■□□□ 1.37
SH3D21-202ENST00000474766 SERPINA10Q9UK55 444 aa23.64■■□□□ 1.37
SH3D21-202ENST00000474766 SYNRGQ9UMZ2 1314 aa23.64■■□□□ 1.37
SH3D21-202ENST00000474766 A0A087WUV0 522 aaPredicted RBP23.63■■□□□ 1.37
SH3D21-202ENST00000474766 TSPY3P0CV98 308 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 TSPY8P0CW00 308 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 DLGAP5Q15398 846 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 TYW1BQ6NUM6 668 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 DAGLBQ8NCG7 672 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 GPKOWQ92917 476 aaPredicted RBP eCLIP23.63■■□□□ 1.37
SH3D21-202ENST00000474766 MRIQ9BWK5 157 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 MYO6Q9UM54 1294 aa23.63■■□□□ 1.37
SH3D21-202ENST00000474766 SPDYE2BA6NHP3 402 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 PRPF6O94906 941 aaKnown RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 SPDYE6P0CI01 402 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 RASA1P20936 1047 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 CRKP46108 304 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 GALNT17Q6IS24 598 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 ZNF444Q8N0Y2 327 aaPredicted RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 PRMT6Q96LA8 375 aaPredicted RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 MTRQ99707 1265 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 TARSL2A2RTX5 802 aaKnown RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 PALM3A6NDB9 673 aaPredicted RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 GTPBP6O43824 516 aaPredicted RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 RNF40O75150 1001 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 RBM5P52756 815 aaKnown RBP eCLIP23.62■■□□□ 1.371e-7■■■□□ 18.2
SH3D21-202ENST00000474766 HDLBPQ00341 1268 aaKnown RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 TRIM14Q14142 442 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 ANGEL2Q5VTE6 544 aaKnown RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 WWC2Q6AWC2 1192 aa23.62■■□□□ 1.37
SH3D21-202ENST00000474766 FAM163AQ96GL9 167 aaPredicted RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 SCAF8Q9UPN6 1271 aaKnown RBP23.62■■□□□ 1.37
SH3D21-202ENST00000474766 GPR75-ASB3A0A0A6YYF3 556 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 CYTH3O43739 400 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 SLC44A5Q8NCS7 719 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 RPGRIP1Q96KN7 1286 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 TMEM47Q9BQJ4 181 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 GLIS2Q9BZE0 524 aaPredicted RBP23.61■■□□□ 1.37
SH3D21-202ENST00000474766 DAGLAQ9Y4D2 1042 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 CDK5RAP2Q96SN8 1893 aa23.61■■□□□ 1.37
SH3D21-202ENST00000474766 SYF2O95926 243 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms