RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MTG1Q9BT17 334 aaPredicted RBP17.57■□□□□ 0.4
VARS-223ENST00000474643 AMNQ9BXJ7 453 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 NOD1Q9Y239 953 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
VARS-223ENST00000474643 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
VARS-223ENST00000474643 KLRF2D3W0D1 207 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 KPNA6O60684 536 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 SUPT20HL2P0C7V6 817 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 ACRP10323 421 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 TRAF1Q13077 416 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 STXBP2Q15833 593 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 TMEM63BQ5T3F8 832 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 SEPT14Q6ZU15 432 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 GUCD1Q96NT3 240 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■□□□ 14.4
VARS-223ENST00000474643 MAF1Q9H063 256 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
VARS-223ENST00000474643 SLC27A2O14975 620 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 B4GALT4O60513 344 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 CD4P01730 458 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 CCL23P55773 120 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 WTAPQ15007 396 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 LCTP09848 1927 aa17.55■□□□□ 0.4
VARS-223ENST00000474643 TMEM265A0A087WTH1 108 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 RBM47A0AV96 593 aaKnown RBP17.54■□□□□ 0.4
VARS-223ENST00000474643 REC8O95072 547 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 FOSL2P15408 326 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 EIF2AK2P19525 551 aaKnown RBP17.54■□□□□ 0.4
VARS-223ENST00000474643 DNAJB2P25686 324 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 PURAQ00577 322 aaKnown RBP17.54■□□□□ 0.4
VARS-223ENST00000474643 ZNF365Q70YC5 407 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 CYB5R4Q7L1T6 521 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 CATIPQ7Z7H3 387 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 SLC43A3Q8NBI5 491 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
VARS-223ENST00000474643 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
VARS-223ENST00000474643 IL23AQ9NPF7 189 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
VARS-223ENST00000474643 ZBBXA8MT70 800 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 DLL1O00548 723 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 GH1P01241 217 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 EDNRBP24530 442 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 TMEM67Q5HYA8 995 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 TMEM240Q5SV17 173 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 RPUSD2Q8IZ73 545 aaKnown RBP17.53■□□□□ 0.4
VARS-223ENST00000474643 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 SYTL5Q8TDW5 730 aaPredicted RBP17.53■□□□□ 0.4
VARS-223ENST00000474643 TIFAQ96CG3 184 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 MSRAQ9UJ68 235 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 PCDHA1Q9Y5I3 950 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 MRVI1Q9Y6F6 885 aa17.53■□□□□ 0.4
VARS-223ENST00000474643 ZBTB5O15062 677 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 FGBP02675 491 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 MYCLP12524 364 aaPredicted RBP17.52■□□□□ 0.4
VARS-223ENST00000474643 NECTIN1Q15223 517 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 STOX1Q6ZVD7 989 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 MAFAQ8NHW3 353 aaPredicted RBP17.52■□□□□ 0.4
VARS-223ENST00000474643 MYLIPQ8WY64 445 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 COPS5Q92905 334 aa17.52■□□□□ 0.4
VARS-223ENST00000474643 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
VARS-223ENST00000474643 TRMT13Q9NUP7 481 aaKnown RBP17.52■□□□□ 0.4
VARS-223ENST00000474643 GRIN2DO15399 1336 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 MYH6P13533 1939 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 SEC23AQ15436 765 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 LY6KQ17RY6 165 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
VARS-223ENST00000474643 A6NJR5 290 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
VARS-223ENST00000474643 CYP2C9P11712 490 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
VARS-223ENST00000474643 MCM5P33992 734 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 RAB30Q15771 203 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 CCDC155Q8N6L0 562 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
VARS-223ENST00000474643 AFG1LQ8WV93 481 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 TTYH1Q9H313 450 aaPredicted RBP17.5■□□□□ 0.39
VARS-223ENST00000474643 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
VARS-223ENST00000474643 UMODL1Q5DID0 1318 aa17.49■□□□□ 0.39
VARS-223ENST00000474643 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
VARS-223ENST00000474643 GCOM1H8Y6P7 765 aaPredicted RBP17.49■□□□□ 0.39
VARS-223ENST00000474643 PRC1O43663 620 aa17.49■□□□□ 0.39
VARS-223ENST00000474643 POLR2MP0CAP2 368 aa17.49■□□□□ 0.39
VARS-223ENST00000474643 ACTN1P12814 892 aa17.49■□□□□ 0.39
VARS-223ENST00000474643 HOXA13P31271 388 aaPredicted RBP17.49■□□□□ 0.39
VARS-223ENST00000474643 KIF5BP33176 963 aa17.49■□□□□ 0.39
VARS-223ENST00000474643 KRT32Q14532 448 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms