RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CACNB4O00305 520 aaPredicted RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 DGKIO75912 1065 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 FBXO21O94952 628 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 TMEM11P17152 192 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 PSMA4P25789 261 aaKnown RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 CHKAP35790 457 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 GJA9P57773 515 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 MYL6P60660 151 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 DSTNP60981 165 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 IL1RL1Q01638 556 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 IKQ13123 557 aaPredicted RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 CUL4BQ13620 913 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 GNL2Q13823 731 aaKnown RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 BYSLQ13895 437 aaKnown RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 CABP7Q86V35 215 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 WDR63Q8IWG1 891 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 TRIM22Q8IYM9 498 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 LSMEM2Q8N112 164 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 SPDYE1Q8NFV5 336 aaPredicted RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 PJA1Q8NG27 643 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 GIMAP7Q8NHV1 300 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 OTUD7AQ8TE49 926 aaPredicted RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 FAM20AQ96MK3 541 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 CTAGE1Q96RT6 745 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 TUT1Q9H6E5 874 aaKnown RBP3.87□□□□□ -1.79
UBR3-208ENST00000474426 ANGPTL3Q9Y5C1 460 aa3.87□□□□□ -1.79
UBR3-208ENST00000474426 ANO9A1A5B4 782 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ZSCAN5CA6NGD5 496 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 CCDC169A6NNP5 214 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 VSTM5A8MXK1 200 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 RLBP1P12271 317 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ATF4P18848 351 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 DDIT3P35638 169 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 OXCT1P55809 520 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ARHGAP4P98171 946 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 HLTFQ14527 1009 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBR3-208ENST00000474426 MLC1Q15049 377 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 SUPT20HL1Q3ZLR7 823 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 FCRLBQ6BAA4 426 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 NXNQ6DKJ4 435 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ARHGAP11AQ6P4F7 1023 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 MAMDC2Q7Z304 686 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 FAM20CQ8IXL6 584 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 TCEAL8Q8IYN2 117 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 OR52K2Q8NGK3 314 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CHFRQ96EP1 664 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 PDLIM2Q96JY6 352 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 KCNH8Q96L42 1107 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 TTC25Q96NG3 672 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ZNF408Q9H9D4 720 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 RASSF1Q9NS23 344 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 DUSP12Q9UNI6 340 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 TMED5Q9Y3A6 229 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CHURC1-FNTBB4DL54 471 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 SLC7A4O43246 635 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 AHCYL1O43865 530 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 LZTS3O60299 673 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 POTEIP0CG38 1075 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ATP6V1B1P15313 513 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ATP5JP18859 108 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 PMLP29590 882 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CTCFP49711 727 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 ARHGDIBP52566 201 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 AP1B1Q10567 949 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 TRIM71Q2Q1W2 868 aaKnown RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 TMEM53Q6P2H8 277 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 LPCAT2Q7L5N7 544 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 KRT26Q7Z3Y9 468 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 SLC9B2Q86UD5 537 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 MAGEB6Q8N7X4 407 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 L3MBTL3Q96JM7 780 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 GJD4Q96KN9 370 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 C16orf45Q96MC5 204 aaPredicted RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 SGIP1Q9BQI5 828 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 SARGQ9BW04 601 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CCDC106Q9BWC9 280 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 SERHL2Q9H4I8 314 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CLK4Q9HAZ1 481 aaKnown RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 UBAP1LF5GYI3 381 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 MTSS1O43312 755 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ZEB2O60315 1214 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 MAP3K6O95382 1288 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 CNOT4O95628 575 aaKnown RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 NPPAP01160 153 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 DNTTP04053 509 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 FUT4P22083 530 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 GCKP35557 465 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 BASP1P80723 227 aaKnown RBP3.86□□□□□ -1.79
UBR3-208ENST00000474426 MPP1Q00013 466 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 BEX3Q00994 111 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 DR1Q01658 176 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 GPS2Q13227 327 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 G3BP1Q13283 466 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBR3-208ENST00000474426 GNA13Q14344 377 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 ODF1Q14990 250 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 PCSK7Q16549 785 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 AARDQ4LEZ3 155 aa3.86□□□□□ -1.79
UBR3-208ENST00000474426 IGSF11Q5DX21 431 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms