RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PPP1R12AO14974 1030 aaPredicted RBP20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 TRAPPC3O43617 180 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 NEBLO76041 1014 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 PDE8BO95263 885 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 UQCRFS1P1P0C7P4 283 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 MAGEA1P43355 309 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 LRCH2Q5VUJ6 765 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 ARL6IP4Q66PJ3 421 aaKnown RBP20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 ANKRD40Q6AI12 368 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 TLDC1Q6P9B6 456 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 ZBTB38Q8NAP3 1195 aaPredicted RBP20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 C3orf20Q8ND61 904 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 DHTKD1Q96HY7 919 aaPredicted RBP20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 KRT12Q99456 494 aa20.58■□□□□ 0.89
ECHDC1-214ENST00000474289 GOLGA6L10A6NI86 522 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 OPLAHO14841 1288 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 PJA2O43164 708 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 HSPA9P38646 679 aaKnown RBP20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 SCTRP47872 440 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 CLNS1AP54105 237 aaKnown RBP20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 SPATA5Q8NB90 893 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 P2RX5Q93086 422 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 RNF14Q9UBS8 474 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 LEMD3Q9Y2U8 911 aa20.58■□□□□ 0.88
ECHDC1-214ENST00000474289 FRMD3A2A2Y4 597 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 PP2D1A8MPX8 630 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 ZPR1O75312 459 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 C4orf32Q8N8J7 132 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 TBC1D22AQ8WUA7 517 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 NOX5Q96PH1 765 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 ATP6V0A4Q9HBG4 840 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 FAM207AQ9NSI2 230 aaPredicted RBP20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 SMIM22K7EJ46 135 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 CCNE1P24864 410 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 DNA2P51530 1060 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 RASSF7Q02833 373 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 CDC37Q16543 378 aaPredicted RBP20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 FAM114A1Q8IWE2 563 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 SEC16BQ96JE7 1060 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 PLIN2Q99541 437 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 TSKSQ9UJT2 592 aa20.57■□□□□ 0.88
ECHDC1-214ENST00000474289 A0A1B0GUA9 196 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 GCOM1H8Y6P7 765 aaPredicted RBP20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 RTN2O75298 545 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 MYZAPP0CAP1 466 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 XRCC4Q13426 336 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 BYSLQ13895 437 aaKnown RBP20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 LPIN2Q92539 896 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 PLCB1Q9NQ66 1216 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 PCDH11XQ9BZA7 1347 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 PCDH11YQ9BZA8 1340 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 ERVV-2B6SEH9 535 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 BACH1O14867 736 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 GNAT2P19087 354 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 TMOD1P28289 359 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 SLC8A1P32418 973 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 GFPT1Q06210 699 aaPredicted RBP20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 KIRREL3Q8IZU9 778 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 HELBQ8NG08 1087 aaPredicted RBP20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 OR2W6PQ8NHA6 318 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 ESR2Q92731 530 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 SLC24A3Q9HC58 644 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 KBTBD4Q9NVX7 518 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 SIK3Q9Y2K2 1263 aa20.56■□□□□ 0.88
ECHDC1-214ENST00000474289 BICDL2A1A5D9 508 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 LRRC53A6NM62 1247 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 ERCC3P19447 782 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 SLC1A4P43007 532 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 TROAPQ12815 778 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 TRIM28Q13263 835 aaKnown RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 CATIPQ7Z7H3 387 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 MIGA1Q8NAN2 632 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 IQCDQ96DY2 449 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 RBM28Q9NW13 759 aaKnown RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 PNPLA7Q6ZV29 1317 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 CNTNAP5Q8WYK1 1306 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 BCORQ6W2J9 1755 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 MINDY4BA8MYZ0 360 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 HSD17B3P37058 310 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 NLRP5P59047 1200 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 LACTB2Q53H82 288 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 IFIT1BQ5T764 474 aaKnown RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 LRIG3Q6UXM1 1119 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-214ENST00000474289 C5orf60A6NFR6 353 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 H0YGN5 161 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 RAD51CO43502 376 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 MGRN1O60291 552 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 ATP2C2O75185 946 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 MYL1P05976 194 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 IFFO1Q0D2I5 559 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 HLFQ16534 295 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
ECHDC1-214ENST00000474289 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms