RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PRDM1O75626 825 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 CYP2C9P11712 490 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TAP1Q03518 808 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TKFCQ3LXA3 575 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TMEM67Q5HYA8 995 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 PPP4R3BQ5MIZ7 849 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 PPP1R15BQ5SWA1 713 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 SLFN13Q68D06 897 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 KRT40Q6A162 431 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 IQSEC1Q6DN90 963 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 ALYREFQ86V81 257 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 MORC4Q8TE76 937 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 GMCL1Q96IK5 515 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TRERF1Q96PN7 1200 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 CERS4Q9HA82 394 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 VTA1Q9NP79 307 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 C11orf16Q9NQ32 467 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 ZBTB40Q9NUA8 1239 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 TRMT13Q9NUP7 481 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 CYP39A1Q9NYL5 469 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 COG5Q9UP83 839 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 Q9Y3F1 56 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 LCTP09848 1927 aa6.11□□□□□ -1.43
SNRNP40-204ENST00000474025 SCN5AQ14524 2016 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 SCN10AQ9Y5Y9 1956 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 TK2O00142 265 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 GPAA1O43292 621 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 PLA2G6O60733 806 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 SUPT20HL2P0C7V6 817 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 ALAS1P13196 640 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 PURAQ00577 322 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 NBR1Q14596 966 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 DUSP28Q4G0W2 176 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 EEPD1Q7L9B9 569 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 SPRED2Q7Z698 418 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 DEFB128Q7Z7B8 93 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 FAM160B2Q86V87 743 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 ZNF444Q8N0Y2 327 aaPredicted RBP6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 KBTBD3Q8NAB2 608 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 NEDD1Q8NHV4 660 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 PHOSPHO2Q8TCD6 241 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 CHURC1Q8WUH1 139 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 STAG1Q8WVM7 1258 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 ARNTL2Q8WYA1 636 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 APPBP2Q92624 585 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 HLA-CQ95604 372 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 PURBQ96QR8 312 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 SLC9A7Q96T83 725 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 ZNF287Q9HBT7 754 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 ISY1Q9ULR0 285 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 TANC1Q9C0D5 1861 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 FRYLO94915 3013 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 COL4A4P53420 1690 aaPredicted RBP6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 TET1Q8NFU7 2136 aa6.1□□□□□ -1.43
SNRNP40-204ENST00000474025 FAM86C2PA6NEL3 165 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 PRR33A8MZF0 331 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 M0R2C6 588 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 SMARCA5O60264 1052 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 LPXNO60711 386 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 TSPY3P0CV98 308 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 TSPY8P0CW00 308 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 ACTN1P12814 892 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 GNAT2P19087 354 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 MCCP23508 829 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 RFC2P35250 354 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 SLC1A4P43007 532 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 TDO2P48775 406 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 MRE11P49959 708 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 CPT1AP50416 773 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 SNAP25P60880 206 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 IKQ13123 557 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 GRB10Q13322 594 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 ADGRD1Q6QNK2 874 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 KCTD1Q719H9 257 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 HERC6Q8IVU3 1022 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 MTG1Q9BT17 334 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 WDR11Q9BZH6 1224 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 LRRCC1Q9C099 1032 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 ECHDC1Q9NTX5 307 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 POLR3EQ9NVU0 708 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 CCPG1Q9ULG6 757 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 PRR12Q9ULL5 1215 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 DDX19BQ9UMR2 479 aa6.09□□□□□ -1.43
SNRNP40-204ENST00000474025 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 LOC102724159A0A0B4J2E5 919 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 RBM47A0AV96 593 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 LCHNA4D1U4 455 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 PATL2C9JE40 543 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 NFIBO00712 420 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 RNF113AO15541 343 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 BAIAP3O94812 1187 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 APPP05067 770 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 ICAM1P05362 532 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 MYL3P08590 195 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 IQCF3P0C7M6 154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms