RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ERICH2A1L162 156 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 DEUP1Q05D60 604 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 FAAP100Q0VG06 881 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 SNCBQ16143 134 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 BEND6Q5SZJ8 279 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 E4F1Q66K89 784 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 CAPRIN2Q6IMN6 1127 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 MICALCLQ6ZW33 695 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ARHGAP22Q7Z5H3 698 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 VWA5B2Q8N398 1253 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ASAP3Q8TDY4 903 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ZFAND2BQ8WV99 257 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ALS2CR12Q96Q35 445 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 POP1Q99575 1024 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 UBE2OQ9C0C9 1292 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 IGFLR1Q9H665 355 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 FAM204AQ9H8W3 233 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 CDC14CA4D256 554 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 MYL1P05976 194 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 FERP16591 822 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 PEX19P40855 299 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 DRP2Q13474 957 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 KCNB1Q14721 858 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 KIF4BQ2VIQ3 1234 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ANO6Q4KMQ2 910 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RRP12Q5JTH9 1297 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 NUTM2GQ5VZR2 741 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RBM43Q6ZSC3 357 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 HOMER1Q86YM7 354 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 EAF1Q96JC9 268 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RMDN2Q96LZ7 410 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 TSGA10Q9BZW7 698 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 VIPAS39Q9H9C1 493 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CWC25Q9NXE8 425 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 DDX20Q9UHI6 824 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RAB21Q9UL25 225 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CORO1CQ9ULV4 474 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SYNPO2Q9UMS6 1093 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CNPY2Q9Y2B0 182 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 TLR6Q9Y2C9 796 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 PPLO60437 1756 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RASSF9O75901 435 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 URI1O94763 535 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 GHRHP01286 108 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 GARTP22102 1010 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RANBP1P43487 201 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CCT5P48643 541 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 AARSP49588 968 aaKnown RBP eCLIP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 MFSD4BQ5TF39 518 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ARMC3Q5W041 872 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 FBXL19Q6PCT2 694 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SV2AQ7L0J3 742 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 APLFQ8IW19 511 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC146Q8IYE0 955 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 NUP133Q8WUM0 1156 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF296Q8WUU4 475 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SNRNP27Q8WVK2 155 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 RBM17Q96I25 401 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 PRAM1Q96QH2 718 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ARPC5LQ9BPX5 153 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.77□□□□□ -1.492e-9■■■■■ 33.8
TMEM39A-206ENST00000473684 MUC3BQ9H195 1237 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 UTP6Q9NYH9 597 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 L1RE1Q9UN81 338 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 NRAPQ86VF7 1730 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SYNRGQ9UMZ2 1314 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ZFYVE9O95405 1425 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 YTHDC2Q9H6S0 1430 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SPDYE3A6NKU9 549 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 GOLGA6L19H0YKK7 550 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 IFFO1Q0D2I5 559 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 DCTN1Q14203 1278 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 FOXD4L6Q3SYB3 417 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC38Q502W7 563 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 GORABQ5T7V8 394 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 FOXD4L3Q6VB84 417 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SEC16BQ96JE7 1060 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 SPATA32Q96LK8 384 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC114Q96M63 670 aa5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 NAT10Q9H0A0 1025 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 AVENQ9NQS1 362 aaPredicted RBP5.77□□□□□ -1.49
TMEM39A-206ENST00000473684 MYOM2P54296 1465 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ADGRB2O60241 1585 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 KIF1BO60333 1816 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 RGS12O14924 1447 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MYO1FO00160 1098 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 GREM1O60565 184 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PAGE1O75459 146 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 SASH1O94885 1247 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 BMP4P12644 408 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 EIF2AK2P19525 551 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 SYT1P21579 422 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 ZNF165P49910 485 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PAPOLAP51003 745 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 PPP2R3AQ06190 1150 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC40Q4G0X9 1142 aa5.76□□□□□ -1.49
TMEM39A-206ENST00000473684 LRRC23Q53EV4 343 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms