RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MEIS2O14770 477 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 LIG1P18858 919 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 DSG3P32926 999 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 COG2Q14746 738 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
LMNA-213ENST00000473598 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 TBCKQ8TEA7 893 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 FUCA2Q9BTY2 467 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
LMNA-213ENST00000473598 A0A1W2PQ27 194 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 A0A1W2PQ64 194 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 A0A1W2PQD8 194 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 VWA5AO00534 786 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 ZBED4O75132 1171 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 NOGQ13253 232 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
LMNA-213ENST00000473598 ATG4CQ96DT6 458 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 AGBL1Q96MI9 1066 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
LMNA-213ENST00000473598 ZBTB48P10074 688 aaPredicted RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 MCM7P33993 719 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 GEMIN8Q9NWZ8 242 aaKnown RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 CTDP1Q9Y5B0 961 aaPredicted RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 MYPNQ86TC9 1320 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 PIK3CDO00329 1044 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 CUTAO60888 179 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 PTPREP23469 700 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 AP3B2Q13367 1082 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 CPXCR1Q8N123 301 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 KRI1Q8N9T8 703 aaKnown RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 HOXC10Q9NYD6 342 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
LMNA-213ENST00000473598 PNMA2Q9UL42 364 aa16.74■□□□□ 0.27
LMNA-213ENST00000473598 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 PTGDRQ13258 359 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 TERF2Q15554 542 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 MS4A4AQ96JQ5 239 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 SRPRBQ9Y5M8 271 aaKnown RBP16.73■□□□□ 0.27
LMNA-213ENST00000473598 MRVI1Q9Y6F6 885 aa16.73■□□□□ 0.27
LMNA-213ENST00000473598 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 LETM2Q2VYF4 491 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 REPS2Q8NFH8 660 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 GOLPH3LQ9H4A5 285 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 DDX41Q9UJV9 622 aaKnown RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 THSD7BQ9C0I4 1608 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 CCNT1O60563 726 aaKnown RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 CAPN2P17655 700 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 CMA1P23946 247 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 OAZ1P54368 228 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
LMNA-213ENST00000473598 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 FSIP1Q8NA03 581 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 CLIC6Q96NY7 704 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
LMNA-213ENST00000473598 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
LMNA-213ENST00000473598 EDIL3O43854 480 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 NR1I2O75469 434 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 CFBP00751 764 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
LMNA-213ENST00000473598 PTPN18Q99952 460 aa16.71■□□□□ 0.27
LMNA-213ENST00000473598 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 ALAS1P13196 640 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 HOXA13P31271 388 aaPredicted RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 MAP2K2P36507 400 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 GRIN1Q05586 938 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 MOGSQ13724 837 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 ARL6IP4Q66PJ3 421 aaKnown RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 CCDC73Q6ZRK6 1079 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 BRI3BPQ8WY22 251 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 TBC1D5Q92609 795 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 AGTPBP1Q9UPW5 1226 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 LAD1O00515 517 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 FAM160A1Q05DH4 1040 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms