RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 COPS5Q92905 334 aa18.82■□□□□ 0.6
PTK7-211ENST00000473339 KCNB2Q92953 911 aa18.82■□□□□ 0.6
PTK7-211ENST00000473339 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
PTK7-211ENST00000473339 PRDM5Q9NQX1 630 aaPredicted RBP18.82■□□□□ 0.6
PTK7-211ENST00000473339 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
PTK7-211ENST00000473339 PNMA6FA0A0J9YX94 578 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
PTK7-211ENST00000473339 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
PTK7-211ENST00000473339 NSUN6Q8TEA1 469 aaKnown RBP18.81■□□□□ 0.6
PTK7-211ENST00000473339 TMEM87BQ96K49 555 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 PXMP2Q9NR77 195 aa18.81■□□□□ 0.6
PTK7-211ENST00000473339 A6NJR5 290 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 PLEKHA8P1O95397 391 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 SMARCA1P28370 1054 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
PTK7-211ENST00000473339 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 SCFD2Q8WU76 684 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 AP5M1Q9H0R1 490 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 PRKAG2Q9UGJ0 569 aa18.8■□□□□ 0.6
PTK7-211ENST00000473339 CABYRO75952 493 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 CFBP00751 764 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 NR3C2P08235 984 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 RXRAP19793 462 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
PTK7-211ENST00000473339 PSMC6P62333 389 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 SHHQ15465 462 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 CASC1Q6TDU7 716 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 IL31RAQ8NI17 732 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 LBHD1Q9BQE6 289 aaPredicted RBP18.79■□□□□ 0.6
PTK7-211ENST00000473339 PDCD2LQ9BRP1 358 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 TMEM39AQ9NV64 488 aa18.79■□□□□ 0.6
PTK7-211ENST00000473339 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
PTK7-211ENST00000473339 DCDC2CA8MYV0 355 aa18.78■□□□□ 0.6
PTK7-211ENST00000473339 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTK7-211ENST00000473339 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
PTK7-211ENST00000473339 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
PTK7-211ENST00000473339 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
PTK7-211ENST00000473339 C16orf59Q7L2K0 433 aa18.78■□□□□ 0.6
PTK7-211ENST00000473339 CMTR1Q8N1G2 835 aaKnown RBP18.78■□□□□ 0.6
PTK7-211ENST00000473339 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
PTK7-211ENST00000473339 NEK1Q96PY6 1258 aa18.78■□□□□ 0.6
PTK7-211ENST00000473339 TIMP1P01033 207 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 ARHGAP1Q07960 439 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 FUT2Q10981 343 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 PPP2R5BQ15173 497 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 STXBP2Q15833 593 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 LY6KQ17RY6 165 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 GPR153Q6NV75 609 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 VSIG10LQ86VR7 867 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 RAB11FIP4Q86YS3 637 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 VWCEQ96DN2 955 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 TCEANC2Q96MN5 208 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 DDX41Q9UJV9 622 aaKnown RBP18.77■□□□□ 0.6
PTK7-211ENST00000473339 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
PTK7-211ENST00000473339 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 MROH7Q68CQ1 1323 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
PTK7-211ENST00000473339 TTLL4Q14679 1199 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 ARHGEF16Q5VV41 709 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 SEPT14Q6ZU15 432 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 OR6J1Q8NGC5 347 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 VTI1AQ96AJ9 217 aa18.76■□□□□ 0.59
PTK7-211ENST00000473339 FAM217BQ9NTX9 383 aaPredicted RBP18.76■□□□□ 0.59
PTK7-211ENST00000473339 MYH6P13533 1939 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 MEIS2O14770 477 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 ZEB2O60315 1214 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 B4GALT4O60513 344 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 RAG1P15918 1043 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 HSPA4P34932 840 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 CPT1AP50416 773 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 PGM5Q15124 567 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 DHX32Q7L7V1 743 aaKnown RBP18.75■□□□□ 0.59
PTK7-211ENST00000473339 FANCBQ8NB91 859 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 CTCFLQ8NI51 663 aaPredicted RBP18.75■□□□□ 0.59
PTK7-211ENST00000473339 PIBF1Q8WXW3 757 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 MPHOSPH6Q99547 160 aaKnown RBP18.75■□□□□ 0.59
PTK7-211ENST00000473339 LZTS2Q9BRK4 669 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 TRPV6Q9H1D0 765 aa18.75■□□□□ 0.59
PTK7-211ENST00000473339 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 SCN10AQ9Y5Y9 1956 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 CCDC69A6NI79 296 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 B4DLN1 442 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 GCOM1H8Y6P7 765 aaPredicted RBP18.74■□□□□ 0.59
PTK7-211ENST00000473339 POLR2MP0CAP2 368 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 KIF5BP33176 963 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 MRPL12P52815 198 aaKnown RBP18.74■□□□□ 0.59
PTK7-211ENST00000473339 MRPS9P82933 396 aaKnown RBP18.74■□□□□ 0.59
PTK7-211ENST00000473339 SP2Q02086 613 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 RNF20Q5VTR2 975 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 APOA5Q6Q788 366 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 KAT2BQ92831 832 aa18.74■□□□□ 0.59
PTK7-211ENST00000473339 GPKOWQ92917 476 aaPredicted RBP eCLIP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms