RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
SMC4-214ENST00000472991 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 NID2Q14112 1375 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 TNPO2O14787 897 aaKnown RBP10.56□□□□□ -0.72
SMC4-214ENST00000472991 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 TAL1P17542 331 aaPredicted RBP10.56□□□□□ -0.72
SMC4-214ENST00000472991 ERCC3P19447 782 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 STAT3P40763 770 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 MMP16P51512 607 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 NEK4P51957 841 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 AK2P54819 239 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 FCGRTP55899 365 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 CDC37Q16543 378 aaPredicted RBP10.56□□□□□ -0.72
SMC4-214ENST00000472991 RTN1Q16799 776 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
SMC4-214ENST00000472991 OTOP1Q7RTM1 612 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 RIOX2Q8IUF8 465 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
SMC4-214ENST00000472991 ADGRF4Q8IZF3 695 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 TEX13BQ9BXU2 312 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 TRIM17Q9Y577 477 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 HTTP42858 3142 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 ZNF536O15090 1300 aa10.56□□□□□ -0.72
SMC4-214ENST00000472991 LRRC37A2A6NM11 1700 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 ATP2A1O14983 1001 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 CYTH3O43739 400 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 MAPK4P31152 587 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMC4-214ENST00000472991 RCAN1P53805 252 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 OAZ1P54368 228 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 GPR142Q7Z601 462 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
SMC4-214ENST00000472991 HOMER1Q86YM7 354 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
SMC4-214ENST00000472991 FANCBQ8NB91 859 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 SHCBP1Q8NEM2 672 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SMC4-214ENST00000472991 JMJD4Q9H9V9 463 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 CCPG1Q9ULG6 757 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
SMC4-214ENST00000472991 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 SLC25A27O95847 323 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 ICAM1P05362 532 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 ALAS1P13196 640 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 CDC27P30260 824 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 COPB2P35606 906 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 GNAQP50148 359 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 EVCP57679 992 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 PRKCZQ05513 592 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 FOXC1Q12948 553 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 USH1GQ495M9 461 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 SRBD1Q8N5C6 995 aaKnown RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 PIBF1Q8WXW3 757 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 COA7Q96BR5 231 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 PIGSQ96S52 555 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 RNF146Q9NTX7 359 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
SMC4-214ENST00000472991 GABRQQ9UN88 632 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 KIAA1217Q5T5P2 1943 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
SMC4-214ENST00000472991 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 ZBTB5O15062 677 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 ZMYND10O75800 440 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
SMC4-214ENST00000472991 GNRH1P01148 92 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
SMC4-214ENST00000472991 STK3Q13188 491 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 RABEP1Q15276 862 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 MROH8Q9H579 483 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
SMC4-214ENST00000472991 SRRDQ9UH36 339 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 TPCN1Q9ULQ1 816 aa10.53□□□□□ -0.72
SMC4-214ENST00000472991 CENPFP49454 3210 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.73
SMC4-214ENST00000472991 LARGE1O95461 756 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 HOXD10P28358 340 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
SMC4-214ENST00000472991 FLT3LGP49771 235 aa10.52□□□□□ -0.73
SMC4-214ENST00000472991 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms