RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR6J1Q8NGC5 347 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 PPP1R12CQ9BZL4 782 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 TRPV6Q9H1D0 765 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 COL20A1Q9P218 1284 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 A6NJR5 290 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 KLRF2D3W0D1 207 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 B4GALT4O60513 344 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 TXNP10599 105 aaKnown RBP17.82■□□□□ 0.44
VTI1A-203ENST00000472892 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 CDX2Q99626 313 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-203ENST00000472892 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 ALDH8A1Q9H2A2 487 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-203ENST00000472892 TTYH1Q9H313 450 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-203ENST00000472892 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
VTI1A-203ENST00000472892 TMEM265A0A087WTH1 108 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 KPNA6O60684 536 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 MYL3P08590 195 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 GHRHRQ02643 423 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 TTLL4Q14679 1199 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 BRDTQ58F21 947 aaPredicted RBP17.81■□□□□ 0.44
VTI1A-203ENST00000472892 CCDC62Q6P9F0 684 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 COPS5Q92905 334 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 MAP4K1Q92918 833 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 RMDN3Q96TC7 470 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 MTG1Q9BT17 334 aaPredicted RBP17.81■□□□□ 0.44
VTI1A-203ENST00000472892 NOC4LQ9BVI4 516 aaKnown RBP17.81■□□□□ 0.44
VTI1A-203ENST00000472892 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
VTI1A-203ENST00000472892 TAF6LQ9Y6J9 622 aa17.81■□□□□ 0.44
VTI1A-203ENST00000472892 E7EWF7 191 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 IFIT3O14879 490 aaKnown RBP17.8■□□□□ 0.44
VTI1A-203ENST00000472892 ZBTB5O15062 677 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 ARIH2O95376 493 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 ACRP10323 421 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 STXBP2Q15833 593 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
VTI1A-203ENST00000472892 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
VTI1A-203ENST00000472892 MAP3K20Q9NYL2 800 aaKnown RBP17.8■□□□□ 0.44
VTI1A-203ENST00000472892 UMODL1Q5DID0 1318 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 OPLAHO14841 1288 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 PPP1R11O60927 126 aaPredicted RBP17.79■□□□□ 0.44
VTI1A-203ENST00000472892 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 HSD17B4P51659 736 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 TROAPQ12815 778 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 GRM4Q14833 912 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 SLC35G1Q2M3R5 365 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 STOX1Q6ZVD7 989 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
VTI1A-203ENST00000472892 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 HERVK_113Q902F9 699 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
VTI1A-203ENST00000472892 ERICH2A1L162 156 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
VTI1A-203ENST00000472892 CFBP00751 764 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 FGBP02675 491 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 WTAPQ15007 396 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 NBPF20Q3BBV1 942 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 ARHGEF16Q5VV41 709 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 NFRKBQ6P4R8 1299 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 SEPT14Q6ZU15 432 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 IGDCC4Q8TDY8 1250 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 WNT8AQ9H1J5 351 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 PXMP2Q9NR77 195 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 TRMT13Q9NUP7 481 aaKnown RBP17.78■□□□□ 0.44
VTI1A-203ENST00000472892 PCDHA1Q9Y5I3 950 aa17.78■□□□□ 0.44
VTI1A-203ENST00000472892 NR3C2P08235 984 aa17.77■□□□□ 0.44
VTI1A-203ENST00000472892 DNAJB2P25686 324 aa17.77■□□□□ 0.44
VTI1A-203ENST00000472892 CCL23P55773 120 aa17.77■□□□□ 0.44
VTI1A-203ENST00000472892 PTPN11Q06124 597 aaPredicted RBP17.77■□□□□ 0.44
VTI1A-203ENST00000472892 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
VTI1A-203ENST00000472892 LY6KQ17RY6 165 aa17.77■□□□□ 0.44
VTI1A-203ENST00000472892 CHST3Q7LGC8 479 aa17.77■□□□□ 0.44
VTI1A-203ENST00000472892 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.44
VTI1A-203ENST00000472892 CYTH3O43739 400 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 GH1P01241 217 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 EIF2AK2P19525 551 aaKnown RBP17.76■□□□□ 0.43
VTI1A-203ENST00000472892 ANTXR2P58335 489 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 ARHGAP1Q07960 439 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 TRAF1Q13077 416 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
VTI1A-203ENST00000472892 RPUSD2Q8IZ73 545 aaKnown RBP17.76■□□□□ 0.43
VTI1A-203ENST00000472892 AFG1LQ8WV93 481 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 PIGSQ96S52 555 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
VTI1A-203ENST00000472892 RBM8AQ9Y5S9 174 aaKnown RBP17.76■□□□□ 0.43
VTI1A-203ENST00000472892 CDH23Q9H251 3354 aa17.76■□□□□ 0.43
VTI1A-203ENST00000472892 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 PNMA6FA0A0J9YX94 578 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 DLL1O00548 723 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 CYP2C9P11712 490 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 TMEM67Q5HYA8 995 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 MYLIPQ8WY64 445 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms