RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	TTLL4	Q14679	1199 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	SEC23A	Q15436	765 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	TMEM63B	Q5T3F8	832 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	CYB5R4	Q7L1T6	521 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	NSUN6	Q8TEA1	469 aa	Known RBP	10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	GUCD1	Q96NT3	240 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	AMN	Q9BXJ7	453 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	HIPK3	Q9H422	1215 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	JMJD4	Q9H9V9	463 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	VAT1L	Q9HCJ6	419 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	TMEM265	A0A087WTH1	108 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	KLRF2	D3W0D1	207 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	IFIT3	O14879	490 aa	Known RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	ZBTB5	O15062	677 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	B4GALT4	O60513	344 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	MYL3	P08590	195 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	CYP21A2	P08686	494 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	TXN	P10599	105 aa	Known RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	CSF2RA	P15509	400 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	CYP2C18	P33260	490 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	PURA	Q00577	322 aa	Known RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	NCOA7	Q8NI08	942 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	IWS1	Q96ST2	819 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	RMDN3	Q96TC7	470 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	MTG1	Q9BT17	334 aa	Predicted RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	TRPV6	Q9H1D0	765 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	MAD2L2	Q9UI95	211 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	CHD7	Q9P2D1	2997 aa		10.38	□□□□□ -0.75
CHEK2-223	ENST00000472807	SCN10A	Q9Y5Y9	1956 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	GRIN2D	O15399	1336 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807		E7EWF7	191 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	KPNA6	O60684	536 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	CFB	P00751	764 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	TRAF1	Q13077	416 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	WTAP	Q15007	396 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	STXBP2	Q15833	593 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	ARHGEF16	Q5VV41	709 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	CATIP	Q7Z7H3	387 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	STAG2	Q8N3U4	1231 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	NOC4L	Q9BVI4	516 aa	Known RBP	10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	MTIF3	Q9H2K0	278 aa	Known RBP	10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	IL23A	Q9NPF7	189 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	COL20A1	Q9P218	1284 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	KIAA1217	Q5T5P2	1943 aa		10.37	□□□□□ -0.75
CHEK2-223	ENST00000472807	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	PALM3	A6NDB9	673 aa	Predicted RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807		A6NJR5	290 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	SUPT20HL2	P0C7V6	817 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	ACR	P10323	421 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	EIF2AK2	P19525	551 aa	Known RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	HSD17B4	P51659	736 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	GRM4	Q14833	912 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	TMEM67	Q5HYA8	995 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	TMEM240	Q5SV17	173 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	NFRKB	Q6P4R8	1299 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	SEPT14	Q6ZU15	432 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	HOMER1	Q86YM7	354 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	TBC1D5	Q92609	795 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	COPS5	Q92905	334 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	MAP4K1	Q92918	833 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	MTMR8	Q96EF0	704 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	TAAR1	Q96RJ0	339 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	CDX2	Q99626	313 aa	Predicted RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	SEMA6B	Q9H3T3	888 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	PXMP2	Q9NR77	195 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	TRMT13	Q9NUP7	481 aa	Known RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	MAP3K20	Q9NYL2	800 aa	Known RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	PCDHA1	Q9Y5I3	950 aa		10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	RBM8A	Q9Y5S9	174 aa	Known RBP	10.36	□□□□□ -0.75
CHEK2-223	ENST00000472807	UMODL1	Q5DID0	1318 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	EIF3J	O75822	258 aa	Known RBP	10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	ARIH2	O95376	493 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	GH1	P01241	217 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	DNAJB2	P25686	324 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	CCL23	P55773	120 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	GHRHR	Q02643	423 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	NBPF20	Q3BBV1	942 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	FAM47C	Q5HY64	1035 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	CASC1	Q6TDU7	716 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	STOX1	Q6ZVD7	989 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	ZNF365	Q70YC5	407 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	C16orf59	Q7L2K0	433 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	CHST3	Q7LGC8	479 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	SAMD3	Q8N6K7	520 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	TTYH1	Q9H313	450 aa	Predicted RBP	10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	MRVI1	Q9Y6F6	885 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	TAF6L	Q9Y6J9	622 aa		10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.35	□□□□□ -0.75
CHEK2-223	ENST00000472807	MYO9B	Q13459	2157 aa		10.34	□□□□□ -0.75
CHEK2-223	ENST00000472807	PNMA6F	A0A0J9YX94	578 aa		10.34	□□□□□ -0.75
CHEK2-223	ENST00000472807	OPLAH	O14841	1288 aa		10.34	□□□□□ -0.75
CHEK2-223	ENST00000472807	PPP1R11	O60927	126 aa	Predicted RBP	10.34	□□□□□ -0.75
CHEK2-223	ENST00000472807	DDAH1	O94760	285 aa		10.34	□□□□□ -0.75
CHEK2-223	ENST00000472807	FGB	P02675	491 aa		10.34	□□□□□ -0.75

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