RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 SPDYAQ5MJ70 313 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 PKN3Q6P5Z2 889 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 BORAQ6PGQ7 559 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 USP31Q70CQ4 1352 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 AEBP1Q8IUX7 1158 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 ZSCAN29Q8IWY8 852 aaPredicted RBP3.57□□□□□ -1.84
VPS45-206ENST00000472756 TXNDC5Q8NBS9 432 aaKnown RBP3.57□□□□□ -1.84
VPS45-206ENST00000472756 CFAP43Q8NDM7 1665 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 SEMA4AQ9H3S1 761 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 TIMELESSQ9UNS1 1208 aa3.57□□□□□ -1.84
VPS45-206ENST00000472756 ERCC6L2Q5T890 1561 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 NCOA2Q15596 1464 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 PLB1Q6P1J6 1458 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 WDR33Q9C0J8 1336 aaKnown RBP3.56□□□□□ -1.84
VPS45-206ENST00000472756 ITGAEP38570 1179 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 SELENOPP49908 381 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 DPTQ07507 201 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 SMAD4Q13485 552 aaKnown RBP3.56□□□□□ -1.84
VPS45-206ENST00000472756 AUHQ13825 339 aaKnown RBP3.56□□□□□ -1.84
VPS45-206ENST00000472756 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 NETO2Q8NC67 525 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 FBXO27Q8NI29 283 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 ATG4CQ96DT6 458 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 ZNF512BQ96KM6 892 aaPredicted RBP3.56□□□□□ -1.84
VPS45-206ENST00000472756 SYT3Q9BQG1 590 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 LRRC3Q9BY71 257 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 IKZF4Q9H2S9 585 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 EHMT1Q9H9B1 1298 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 KCNQ5Q9NR82 932 aa3.56□□□□□ -1.84
VPS45-206ENST00000472756 FGD6Q6ZV73 1430 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 PRG4Q92954 1404 aaPredicted RBP3.55□□□□□ -1.84
VPS45-206ENST00000472756 RAB3GAP2Q9H2M9 1393 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS45-206ENST00000472756 ZNF536O15090 1300 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 ZNF644Q9H582 1327 aaPredicted RBP3.55□□□□□ -1.84
VPS45-206ENST00000472756 MEIS1O00470 390 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 PPP1R11O60927 126 aaPredicted RBP3.55□□□□□ -1.84
VPS45-206ENST00000472756 PRPF40AO75400 957 aaKnown RBP3.55□□□□□ -1.84
VPS45-206ENST00000472756 CLEC3AO75596 197 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 CTSHP09668 335 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 TAF1CQ15572 869 aaPredicted RBP3.55□□□□□ -1.84
VPS45-206ENST00000472756 OVOS1Q6IE37 1185 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 FAM124AQ86V42 546 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 KYQ8NBH2 561 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 ZNF503Q96F45 646 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 DDX11Q96FC9 970 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 TMEM74Q96NL1 305 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 CEP89Q96ST8 783 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 PCDH18Q9HCL0 1135 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 PCDHB12Q9Y5F1 795 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 ABCA8O94911 1581 aa3.55□□□□□ -1.84
VPS45-206ENST00000472756 ATP10BO94823 1461 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 TCOF1Q13428 1488 aaKnown RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 MYOM3Q5VTT5 1437 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 SETD5Q9C0A6 1442 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 MTUS2Q5JR59 1369 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 A0A1W2PQ27 194 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 A0A1W2PQ64 194 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 A0A1W2PQC6 194 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 A0A1W2PQD8 194 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 NPIPB8E9PQR5 432 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 TNFRSF10CO14798 259 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 SMARCA5O60264 1052 aaPredicted RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 ZBTB7AO95365 584 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 GSTM1P09488 218 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 TACR1P25103 407 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 NANOS3P60323 173 aaKnown RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 FOXE3Q13461 319 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 FAM50AQ14320 339 aaKnown RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 DIEXFQ68CQ4 756 aaKnown RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 MCTP2Q6DN12 878 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 ZNF585AQ6P3V2 769 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 FAM196AQ6ZSG2 479 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 JAMLQ86YT9 394 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 PALM2Q8IXS6 379 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 Q8TCH9 128 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 PEX11GQ96HA9 241 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 LCORQ96JN0 433 aaPredicted RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 PTCHD1Q96NR3 888 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 FCRL3Q96P31 734 aaPredicted RBP3.54□□□□□ -1.84
VPS45-206ENST00000472756 MTA3Q9BTC8 594 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 RSRP1Q9BUV0 290 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 RXFP1Q9HBX9 757 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 MAPKBP1O60336 1514 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 EHBP1L1Q8N3D4 1523 aa3.54□□□□□ -1.84
VPS45-206ENST00000472756 MUSKO15146 869 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 NARSO43776 548 aaKnown RBP3.53□□□□□ -1.84
VPS45-206ENST00000472756 CYP2C8P10632 490 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 ZNF28P17035 718 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 L1CAMP32004 1257 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 ANKRD39Q53RE8 183 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 PCSK4Q6UW60 755 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 CIR1Q86X95 450 aaPredicted RBP3.53□□□□□ -1.84
VPS45-206ENST00000472756 MIB1Q86YT6 1006 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 NAT16Q8N8M0 369 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 IGDCC4Q8TDY8 1250 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 SIN3AQ96ST3 1273 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 DBR1Q9UK59 544 aaKnown RBP3.53□□□□□ -1.84
VPS45-206ENST00000472756 CLASP1Q7Z460 1538 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 GPATCH8Q9UKJ3 1502 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms