RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.94□□□□□ -1.46
COMMD3-211ENST00000472673 TMEFF2Q9UIK5 374 aaPredicted RBP5.94□□□□□ -1.46
COMMD3-211ENST00000472673 ZSCAN22P10073 491 aaPredicted RBP5.93□□□□□ -1.46
COMMD3-211ENST00000472673 RBM10P98175 930 aaKnown RBP5.93□□□□□ -1.46
COMMD3-211ENST00000472673 KCNAB2Q13303 367 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 ZNF385BQ569K4 471 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 E4F1Q66K89 784 aaPredicted RBP5.93□□□□□ -1.46
COMMD3-211ENST00000472673 WWC2Q6AWC2 1192 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 IGDCC3Q8IVU1 814 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 CCDC103Q8IW40 242 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 TEX2Q8IWB9 1127 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 PPIL6Q8IXY8 311 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 TMEM145Q8NBT3 493 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 NETO2Q8NC67 525 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 KREMEN2Q8NCW0 462 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 NUDT5Q9UKK9 219 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 PCDHA5Q9Y5H7 936 aa5.93□□□□□ -1.46
COMMD3-211ENST00000472673 IQCA1LA6NCM1 817 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 CCDC85CA6NKD9 419 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 ARNTLO00327 626 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 IRS4O14654 1257 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 BUB1BO60566 1050 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 NTRK1P04629 796 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 PFKLP17858 780 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 RPL11P62913 178 aaKnown RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 HSP90AA2PQ14568 343 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 ACBD5Q5T8D3 534 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 LCNL1Q6ZST4 164 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 ST13P5Q8NFI4 369 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 ALG3Q92685 438 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 PEX11GQ96HA9 241 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 SGSM3Q96HU1 749 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 IER2Q9BTL4 223 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
COMMD3-211ENST00000472673 TIMM13Q9Y5L4 95 aaPredicted RBP5.92□□□□□ -1.46
COMMD3-211ENST00000472673 C22orf46C9J442 243 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 MYO1BO43795 1136 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 CAPNS1P04632 268 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 TARBP2Q15633 366 aaKnown RBP5.91□□□□□ -1.46
COMMD3-211ENST00000472673 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 DENND5AQ6IQ26 1287 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 SPOCD1Q6ZMY3 1216 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 CEP68Q76N32 757 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 RCBTB1Q8NDN9 531 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 PLEKHO2Q8TD55 490 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 C1orf159Q96HA4 380 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 AARSD1Q9BTE6 412 aaKnown RBP5.91□□□□□ -1.46
COMMD3-211ENST00000472673 SIT1Q9Y3P8 196 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 IRS2Q9Y4H2 1338 aa5.91□□□□□ -1.46
COMMD3-211ENST00000472673 LCP1P13796 627 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 FPR2P25090 351 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 LTBRP36941 435 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 BCL6P41182 706 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 GTF2A2P52657 109 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 MAP4K2Q12851 820 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 NBPF6Q5VWK0 638 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 CNKSR3Q6P9H4 555 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
COMMD3-211ENST00000472673 TSPAN17Q96FV3 270 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 TRMT2BQ96GJ1 504 aaKnown RBP5.9□□□□□ -1.46
COMMD3-211ENST00000472673 CHAMP1Q96JM3 812 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 NBPF4Q96M43 638 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 HIRIP3Q9BW71 556 aaPredicted RBP5.9□□□□□ -1.46
COMMD3-211ENST00000472673 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
COMMD3-211ENST00000472673 MSRB2Q9Y3D2 182 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 PCDHA2Q9Y5H9 948 aa5.9□□□□□ -1.46
COMMD3-211ENST00000472673 PDPK1O15530 556 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 PRODHO43272 600 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 DLX3O60479 287 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 ASGR2P07307 311 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 FBLN1P23142 703 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 IGFBP6P24592 240 aaPredicted RBP5.89□□□□□ -1.47
COMMD3-211ENST00000472673 PMLP29590 882 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 LIMS1P48059 325 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 TESK1Q15569 626 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 USP53Q70EK8 1073 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 FAM129CQ86XR2 697 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 DCP2Q8IU60 420 aaKnown RBP5.89□□□□□ -1.47
COMMD3-211ENST00000472673 SIAH1Q8IUQ4 282 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 TMEM151BQ8IW70 566 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 TMEM169Q96HH4 297 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 AP5M1Q9H0R1 490 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 ARHGEF4Q9NR80 690 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 FBXL7Q9UJT9 491 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
COMMD3-211ENST00000472673 ZBTB7AO95365 584 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 NCAM1P13591 858 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 ATF2P15336 505 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 AFF3P51826 1226 aaKnown RBP5.88□□□□□ -1.47
COMMD3-211ENST00000472673 SLC9A5Q14940 896 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 MROH9Q5TGP6 573 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms