RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 FDX1P10109 184 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 C7P10643 843 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 SLC1A4P43007 532 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 NOVP48745 357 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 STAT2P52630 851 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
VCL-204ENST00000472585 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 PPARAQ07869 468 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
VCL-204ENST00000472585 GPNMBQ14956 572 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 DUSP28Q4G0W2 176 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 PI4K2BQ8TCG2 481 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 CHURC1Q8WUH1 139 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
VCL-204ENST00000472585 LMCD1Q9NZU5 365 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 Q9Y3F1 56 aa11.07□□□□□ -0.64
VCL-204ENST00000472585 COL4A4P53420 1690 aaPredicted RBP11.07□□□□□ -0.64
VCL-204ENST00000472585 RBM47A0AV96 593 aaKnown RBP11.06□□□□□ -0.64
VCL-204ENST00000472585 NFIBO00712 420 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 MS4A1P11836 297 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 GNAT2P19087 354 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 RFC2P35250 354 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 SLC16A2P36021 539 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 TKFCQ3LXA3 575 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 NSMFQ6X4W1 530 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 COPS5Q92905 334 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 FBXL18Q96ME1 805 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 UBE2ZQ9H832 354 aaPredicted RBP11.06□□□□□ -0.64
VCL-204ENST00000472585 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 WDFY4Q6ZS81 3184 aa11.06□□□□□ -0.64
VCL-204ENST00000472585 MYH4Q9Y623 1939 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 LPXNO60711 386 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
VCL-204ENST00000472585 KCNJ6P48051 423 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
VCL-204ENST00000472585 VTA1Q9NP79 307 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 MYH7P12883 1935 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 TNKSO95271 1327 aa11.05□□□□□ -0.64
VCL-204ENST00000472585 LCTP09848 1927 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 SEC24BO95487 1268 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 ICAM1P05362 532 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 MYL3P08590 195 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 IQCF3P0C7M6 154 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 KCNA5P22460 613 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 ALDH5A1P51649 535 aaPredicted RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 PDE4BQ07343 736 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 LEXMQ3ZCV2 418 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 TMCO2Q7Z6W1 182 aaPredicted RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 GDPD5Q8WTR4 605 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 CCPG1Q9ULG6 757 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
VCL-204ENST00000472585 TRIP12Q14669 1992 aaPredicted RBP11.04□□□□□ -0.64
VCL-204ENST00000472585 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
VCL-204ENST00000472585 LCHNA4D1U4 455 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 DCXO43602 365 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 BAIAP3O94812 1187 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 ARIH2O95376 493 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 FGRP09769 529 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
VCL-204ENST00000472585 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
VCL-204ENST00000472585 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 NAPBQ9H115 298 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
VCL-204ENST00000472585 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.64
VCL-204ENST00000472585 A6NJR5 290 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 IL9P15248 144 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 EDNRBP24530 442 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 BFSP2Q13515 415 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.02□□□□□ -0.65
VCL-204ENST00000472585 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
VCL-204ENST00000472585 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms