RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMEM192Q8IY95 271 aa12.28□□□□□ -0.44
CDHR3-209ENST00000472116 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
CDHR3-209ENST00000472116 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
CDHR3-209ENST00000472116 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
CDHR3-209ENST00000472116 RNF146Q9NTX7 359 aa12.28□□□□□ -0.44
CDHR3-209ENST00000472116 FEM1BQ9UK73 627 aa12.28□□□□□ -0.44
CDHR3-209ENST00000472116 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.44
CDHR3-209ENST00000472116 F5H6K3 240 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 RGS20O76081 388 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 CXCL10P02778 98 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 NDUFV1P49821 464 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 KLRC3Q07444 240 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
CDHR3-209ENST00000472116 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 CCDC184Q52MB2 194 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 ZBTB33Q86T24 672 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 PPP1R13LQ8WUF5 828 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 LMAN2LQ9H0V9 348 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 IGFLR1Q9H665 355 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 ADD3Q9UEY8 706 aaKnown RBP12.27□□□□□ -0.45
CDHR3-209ENST00000472116 LCTP09848 1927 aa12.27□□□□□ -0.45
CDHR3-209ENST00000472116 E9PSI1 815 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDHR3-209ENST00000472116 NDUFB10O96000 172 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 HTRA4P83105 476 aaPredicted RBP12.26□□□□□ -0.45
CDHR3-209ENST00000472116 CTC1Q2NKJ3 1217 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 MPHOSPH6Q99547 160 aaKnown RBP12.26□□□□□ -0.45
CDHR3-209ENST00000472116 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 ALG13Q9NP73 1137 aaKnown RBP12.26□□□□□ -0.45
CDHR3-209ENST00000472116 ATP8A2Q9NTI2 1148 aa12.26□□□□□ -0.45
CDHR3-209ENST00000472116 MYO10Q9HD67 2058 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 NBNO60934 754 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 GNAI2P04899 355 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 ALAS1P13196 640 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
CDHR3-209ENST00000472116 IKQ13123 557 aaPredicted RBP12.25□□□□□ -0.45
CDHR3-209ENST00000472116 PPP2R5BQ15173 497 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 TMEM63BQ5T3F8 832 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 FRMD5Q7Z6J6 570 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 C11orf84Q9BUA3 381 aaPredicted RBP12.25□□□□□ -0.45
CDHR3-209ENST00000472116 ANTXR1Q9H6X2 564 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
CDHR3-209ENST00000472116 BAHCC1Q9P281 2608 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 MYH7P12883 1935 aa12.25□□□□□ -0.45
CDHR3-209ENST00000472116 LOC730098B7Z3J9 87 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 TBX10O75333 385 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 LGR5O75473 907 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 CKBP12277 381 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 PDE6AP16499 860 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 CTNNB1P35222 781 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 HYAL1Q12794 435 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 NSMFQ6X4W1 530 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDHR3-209ENST00000472116 EMSYQ7Z589 1322 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 LCORLQ8N3X6 602 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 ASIC4Q96FT7 647 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 CNTNAP3BQ96NU0 1288 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 CNTNAP3Q9BZ76 1288 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
CDHR3-209ENST00000472116 NYAP2Q9P242 653 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
CDHR3-209ENST00000472116 RWDD3Q9Y3V2 267 aa12.24□□□□□ -0.45
CDHR3-209ENST00000472116 DDX49Q9Y6V7 483 aaKnown RBP12.24□□□□□ -0.45
CDHR3-209ENST00000472116 ACACBO00763 2458 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 EP300Q09472 2414 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 MYH7BA7E2Y1 1941 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 KMT2BQ9UMN6 2715 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 ZNF532Q9HCE3 1301 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 UPP2O95045 317 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 RBL2Q08999 1139 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 PUM1Q14671 1186 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 CBX2Q14781 532 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 GPNMBQ14956 572 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
CDHR3-209ENST00000472116 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 MYO15AQ9UKN7 3530 aa12.23□□□□□ -0.45
CDHR3-209ENST00000472116 NCOR2Q9Y618 2525 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 A6NJR5 290 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 SURF6O75683 361 aaKnown RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 EYA4O95677 639 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 RB1P06400 928 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 ICAM3P32942 547 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 STAT2P52630 851 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 PDE4BQ07343 736 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 GDF6Q6KF10 455 aaPredicted RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
CDHR3-209ENST00000472116 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
CDHR3-209ENST00000472116 FIBCD1Q8N539 461 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms