RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NSUN6Q8TEA1 469 aaKnown RBP26.27■■□□□ 1.8
C9orf3-213ENST00000471978 COPS5Q92905 334 aa26.27■■□□□ 1.8
C9orf3-213ENST00000471978 ALDH8A1Q9H2A2 487 aaPredicted RBP26.27■■□□□ 1.8
C9orf3-213ENST00000471978 COL20A1Q9P218 1284 aa26.27■■□□□ 1.8
C9orf3-213ENST00000471978 UMODL1Q5DID0 1318 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 KLRF2D3W0D1 207 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 TTLL4Q14679 1199 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 PSRC1Q6PGN9 363 aaPredicted RBP26.26■■□□□ 1.79
C9orf3-213ENST00000471978 ZNF365Q70YC5 407 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 RMDN3Q96TC7 470 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 MTG1Q9BT17 334 aaPredicted RBP26.26■■□□□ 1.79
C9orf3-213ENST00000471978 NOC4LQ9BVI4 516 aaKnown RBP26.26■■□□□ 1.79
C9orf3-213ENST00000471978 IL23AQ9NPF7 189 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 MAD2L2Q9UI95 211 aa26.26■■□□□ 1.79
C9orf3-213ENST00000471978 ARIH2O95376 493 aa26.25■■□□□ 1.79
C9orf3-213ENST00000471978 AMNQ9BXJ7 453 aa26.25■■□□□ 1.79
C9orf3-213ENST00000471978 TMEM265A0A087WTH1 108 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 A6NJR5 290 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 IFIT3O14879 490 aaKnown RBP26.24■■□□□ 1.79
C9orf3-213ENST00000471978 SGSM2O43147 1006 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 DNAJB2P25686 324 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 CCL23P55773 120 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 RASIP1Q5U651 963 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 IWS1Q96ST2 819 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 TRMT13Q9NUP7 481 aaKnown RBP26.24■■□□□ 1.79
C9orf3-213ENST00000471978 MYH6P13533 1939 aa26.24■■□□□ 1.79
C9orf3-213ENST00000471978 ERICH2A1L162 156 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 PALM3A6NDB9 673 aaPredicted RBP26.23■■□□□ 1.79
C9orf3-213ENST00000471978 KPNA6O60684 536 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 CFBP00751 764 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 STXBP2Q15833 593 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 ARHGEF16Q5VV41 709 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 SEPT14Q6ZU15 432 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 RALYLQ86SE5 291 aaKnown RBP26.23■■□□□ 1.79
C9orf3-213ENST00000471978 MYLIPQ8WY64 445 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 MTMR8Q96EF0 704 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 TAF6LQ9Y6J9 622 aa26.23■■□□□ 1.79
C9orf3-213ENST00000471978 E7EWF7 191 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 DLL1O00548 723 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 ZBTB5O15062 677 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 SUPT20HL2P0C7V6 817 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 NBPF20Q3BBV1 942 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 FAM47CQ5HY64 1035 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 CCDC62Q6P9F0 684 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 NCOA7Q8NI08 942 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 WNT8AQ9H1J5 351 aa26.22■■□□□ 1.79
C9orf3-213ENST00000471978 PPP1R11O60927 126 aaPredicted RBP26.21■■□□□ 1.79
C9orf3-213ENST00000471978 FGBP02675 491 aa26.21■■□□□ 1.79
C9orf3-213ENST00000471978 EIF2AK2P19525 551 aaKnown RBP26.21■■□□□ 1.79
C9orf3-213ENST00000471978 GRM4Q14833 912 aa26.21■■□□□ 1.79
C9orf3-213ENST00000471978 SART3Q15020 963 aaKnown RBP26.21■■□□□ 1.79
C9orf3-213ENST00000471978 HERVK_113Q902F9 699 aa26.21■■□□□ 1.79
C9orf3-213ENST00000471978 SENP2Q9HC62 589 aa26.21■■□□□ 1.79
C9orf3-213ENST00000471978 PCDHA1Q9Y5I3 950 aa26.21■■□□□ 1.79
C9orf3-213ENST00000471978 GRXCR1A8MXD5 290 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 OPLAHO14841 1288 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 CYP2C9P11712 490 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 HSD17B4P51659 736 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 WTAPQ15007 396 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 LY6KQ17RY6 165 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 STOX1Q6ZVD7 989 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 CHST3Q7LGC8 479 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 TIFAQ96CG3 184 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 PXMP2Q9NR77 195 aa26.2■■□□□ 1.78
C9orf3-213ENST00000471978 PRUNE2Q8WUY3 3088 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 CHD9Q3L8U1 2897 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 GH1P01241 217 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 NFRKBQ6P4R8 1299 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 HOMER1Q86YM7 354 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 PPP1R13LQ8WUF5 828 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 AFG1LQ8WV93 481 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 MAP4K1Q92918 833 aa26.19■■□□□ 1.78
C9orf3-213ENST00000471978 MTIF3Q9H2K0 278 aaKnown RBP26.19■■□□□ 1.78
C9orf3-213ENST00000471978 CXXC1Q9P0U4 656 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-213ENST00000471978 CUL9Q8IWT3 2517 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 EIF3JO75822 258 aaKnown RBP26.18■■□□□ 1.78
C9orf3-213ENST00000471978 NR3C2P08235 984 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 FOSL2P15408 326 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 GHRHRQ02643 423 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 SLC35G1Q2M3R5 365 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 OTOP2Q7RTS6 562 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 RPUSD2Q8IZ73 545 aaKnown RBP26.18■■□□□ 1.78
C9orf3-213ENST00000471978 MAFAQ8NHW3 353 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-213ENST00000471978 SCLYQ96I15 445 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 PIGSQ96S52 555 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 PBX4Q9BYU1 374 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 RIOX1Q9H6W3 641 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 SCN10AQ9Y5Y9 1956 aa26.18■■□□□ 1.78
C9orf3-213ENST00000471978 PBX2P40425 430 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 CHMP4BP1P59074 171 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 ARHGAP1Q07960 439 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 TROAPQ12815 778 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 GRIN2CQ14957 1233 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 TMEM67Q5HYA8 995 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 ZNF576Q9H609 170 aa26.17■■□□□ 1.78
C9orf3-213ENST00000471978 MAP3K20Q9NYL2 800 aaKnown RBP26.17■■□□□ 1.78
C9orf3-213ENST00000471978 RBM8AQ9Y5S9 174 aaKnown RBP26.17■■□□□ 1.78
C9orf3-213ENST00000471978 MMP3P08254 477 aa26.16■■□□□ 1.78
C9orf3-213ENST00000471978 PTPN11Q06124 597 aaPredicted RBP26.16■■□□□ 1.78
C9orf3-213ENST00000471978 TRAF1Q13077 416 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms