RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PURAQ00577 322 aaKnown RBP13.4□□□□□ -0.26
COL4A3-205ENST00000471862 FPGSQ05932 587 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 ITGA7Q13683 1181 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 CCDC62Q6P9F0 684 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 Q7L0L9 218 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
COL4A3-205ENST00000471862 COPS5Q92905 334 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 IWS1Q96ST2 819 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 RMDN3Q96TC7 470 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 COL6A3P12111 3177 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 A6NJR5 290 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 CPT1AP50416 773 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 PSMC6P62333 389 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-205ENST00000471862 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 SAMD3Q8N6K7 520 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 PIGSQ96S52 555 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-205ENST00000471862 PXMP2Q9NR77 195 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
COL4A3-205ENST00000471862 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
COL4A3-205ENST00000471862 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-205ENST00000471862 PRC1O43663 620 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 DDAH1O94760 285 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 CFBP00751 764 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
COL4A3-205ENST00000471862 TTLL4Q14679 1199 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 MYH7BA7E2Y1 1941 aa13.38□□□□□ -0.27
COL4A3-205ENST00000471862 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 B4GALT4O60513 344 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 NR3C2P08235 984 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 EIF2AK2P19525 551 aaKnown RBP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 MCM5P33992 734 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 ARHGAP1Q07960 439 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 PPIGQ13427 754 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 STXBP2Q15833 593 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-205ENST00000471862 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
COL4A3-205ENST00000471862 KPNA6O60684 536 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
COL4A3-205ENST00000471862 RGS20O76081 388 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 MYL3P08590 195 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 CSF2RAP15509 400 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 LIFRP42702 1097 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 TRAF1Q13077 416 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 LY6KQ17RY6 165 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 TMEM240Q5SV17 173 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 TMTC2Q8N394 836 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 RNPC3Q96LT9 517 aaKnown RBP13.36□□□□□ -0.27
COL4A3-205ENST00000471862 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 NOC4LQ9BVI4 516 aaKnown RBP13.36□□□□□ -0.27
COL4A3-205ENST00000471862 TRPV6Q9H1D0 765 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
COL4A3-205ENST00000471862 GH1P01241 217 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 MMP3P08254 477 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-205ENST00000471862 CYP2C18P33260 490 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 PGM5Q15124 567 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-205ENST00000471862 SEPT14Q6ZU15 432 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 VSIG10LQ86VR7 867 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 TMEM199Q8N511 208 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-205ENST00000471862 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-205ENST00000471862 GUCD1Q96NT3 240 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 WNT8AQ9H1J5 351 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
COL4A3-205ENST00000471862 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 TANC1Q9C0D5 1861 aa13.35□□□□□ -0.27
COL4A3-205ENST00000471862 SCN5AQ14524 2016 aa13.34□□□□□ -0.27
COL4A3-205ENST00000471862 GCOM1H8Y6P7 765 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-205ENST00000471862 CDC45O75419 566 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms