RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 ALDH8A1Q9H2A2 487 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-204ENST00000471511 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
RPRD1B-204ENST00000471511 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-204ENST00000471511 PRUNE2Q8WUY3 3088 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 A6NJR5 290 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 HIP1O00291 1037 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 CYTH3O43739 400 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 RGS20O76081 388 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 MYL3P08590 195 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 IQCA1Q86XH1 822 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 OR6J1Q8NGC5 347 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 KAT2BQ92831 832 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 PBX4Q9BYU1 374 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 HIPK3Q9H422 1215 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 BCAS3Q9H6U6 928 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 YBX2Q9Y2T7 364 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 VCANP13611 3396 aa11.43□□□□□ -0.58
RPRD1B-204ENST00000471511 MROH7Q68CQ1 1323 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 SGSM2O43147 1006 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 CABYRO75952 493 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 PARP1P09874 1014 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 TXNP10599 105 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 KCNA4P22459 653 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 DNAJB2P25686 324 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 ARHGAP1Q07960 439 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 PDE4DQ08499 809 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 GPNMBQ14956 572 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 ASPRV1Q53RT3 343 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 GPKOWQ92917 476 aaPredicted RBP eCLIP11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 KRT23Q9C075 422 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 TELO2Q9Y4R8 837 aa11.42□□□□□ -0.58
RPRD1B-204ENST00000471511 ABCB11O95342 1321 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 KLRF2D3W0D1 207 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 E7EWF7 191 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 MYOGP15173 224 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 EIF2AK2P19525 551 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 RABGGTBP53611 331 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 TROAPQ12815 778 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 HIC1Q14526 733 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 TTLL4Q14679 1199 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 TCTN1Q2MV58 587 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 IFIT1BQ5T764 474 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 OTOP2Q7RTS6 562 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 HERVK_113Q902F9 699 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 PIGSQ96S52 555 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 DDX41Q9UJV9 622 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-204ENST00000471511 ZEB2O60315 1214 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 SORBS3O60504 671 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 ARHGEF15O94989 841 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 CFBP00751 764 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 NR3C2P08235 984 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 HOXA13P31271 388 aaPredicted RBP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 HSD17B4P51659 736 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 SP2Q02086 613 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 GHRHRQ02643 423 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 ADGRE1Q14246 886 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 GRM4Q14833 912 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 PPP2R5BQ15173 497 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 MAFAQ8NHW3 353 aaPredicted RBP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 SCFD2Q8WU76 684 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 MAP4K1Q92918 833 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 TIFAQ96CG3 184 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 PXMP2Q9NR77 195 aa11.4□□□□□ -0.58
RPRD1B-204ENST00000471511 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.59
RPRD1B-204ENST00000471511 SCN10AQ9Y5Y9 1956 aa11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 RAD50Q92878 1312 aa11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 DHX16O60231 1041 aaKnown RBP11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 FGBP02675 491 aa11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 MMP3P08254 477 aa11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 GDF6Q6KF10 455 aaPredicted RBP11.39□□□□□ -0.59
RPRD1B-204ENST00000471511 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms