RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ATG4CQ96DT6 458 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 CCDC39Q9UFE4 941 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 ADAMTS5Q9UNA0 930 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 BIN1O00499 593 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 SARSP49591 514 aaKnown RBP29.31■■■□□ 2.28
U2AF1-208ENST00000471250 GHRHRQ02643 423 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 KARSQ15046 597 aaKnown RBP29.31■■■□□ 2.28
U2AF1-208ENST00000471250 Q4G0T1 1027 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 CABP7Q86V35 215 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 CPXCR1Q8N123 301 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 PTPRFP10586 1907 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 HSD17B4P51659 736 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 COG2Q14746 738 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 MCF2L2Q86YR7 1114 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 SAMD3Q8N6K7 520 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 RAB34Q9BZG1 259 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 EHMT1Q9H9B1 1298 aa29.31■■■□□ 2.28
U2AF1-208ENST00000471250 PPATQ06203 517 aa29.3■■■□□ 2.28
U2AF1-208ENST00000471250 LUZP1Q86V48 1076 aa29.3■■■□□ 2.28
U2AF1-208ENST00000471250 SPATA20Q8TB22 786 aa29.3■■■□□ 2.28
U2AF1-208ENST00000471250 KCNMB3Q9NPA1 279 aa29.3■■■□□ 2.28
U2AF1-208ENST00000471250 ALAS1P13196 640 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 STAT6P42226 847 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 CCDC173Q0VFZ6 552 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 IQCB1Q15051 598 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 DPCR1Q3MIW9 517 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 RRAGBQ5VZM2 374 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 REPS2Q8NFH8 660 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 CNKSR2Q8WXI2 1034 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 SMARCE1Q969G3 411 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 NAT10Q9H0A0 1025 aaKnown RBP29.29■■■□□ 2.28
U2AF1-208ENST00000471250 TTC12Q9H892 705 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-208ENST00000471250 ELP3Q9H9T3 547 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 LRWD1Q9UFC0 647 aa29.29■■■□□ 2.28
U2AF1-208ENST00000471250 MYPNQ86TC9 1320 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 MARCH6O60337 910 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 AFMP43652 599 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 TTLL12Q14166 644 aaPredicted RBP29.28■■■□□ 2.28
U2AF1-208ENST00000471250 MOB2Q70IA6 237 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 ERO1BQ86YB8 467 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 PPP1R9BQ96SB3 815 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 MMTAG2Q9BU76 263 aaKnown RBP29.28■■■□□ 2.28
U2AF1-208ENST00000471250 TBX3O15119 743 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 SMC2O95347 1197 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 OAZ1P54368 228 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 ARMC9Q7Z3E5 817 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 WNK4Q96J92 1243 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 BPIFA3Q9BQP9 254 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 MAP3K20Q9NYL2 800 aaKnown RBP29.28■■■□□ 2.28
U2AF1-208ENST00000471250 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.28■■■□□ 2.28
U2AF1-208ENST00000471250 MAN1B1Q9UKM7 699 aa29.28■■■□□ 2.28
U2AF1-208ENST00000471250 COL11A1P12107 1806 aaPredicted RBP29.27■■■□□ 2.28
U2AF1-208ENST00000471250 RBBP6Q7Z6E9 1792 aaKnown RBP29.27■■■□□ 2.28
U2AF1-208ENST00000471250 NFIBO00712 420 aa29.27■■■□□ 2.28
U2AF1-208ENST00000471250 NAALADL2Q58DX5 795 aa29.27■■■□□ 2.28
U2AF1-208ENST00000471250 SLFN12Q8IYM2 578 aa29.27■■■□□ 2.28
U2AF1-208ENST00000471250 RASSF8Q8NHQ8 419 aa29.27■■■□□ 2.28
U2AF1-208ENST00000471250 CLMNQ96JQ2 1002 aa29.27■■■□□ 2.28
U2AF1-208ENST00000471250 SPDYE5A6NIY4 337 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 DPYDQ12882 1025 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 PRR16Q569H4 304 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 MUM1L1Q5H9M0 696 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 ISM2Q6H9L7 571 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 TRIML1Q8N9V2 468 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 ETNPPLQ8TBG4 499 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 LENG9Q96B70 501 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 CUEDC2Q9H467 287 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 HOXC10Q9NYD6 342 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 PCDHA12Q9UN75 941 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 CLEC11AQ9Y240 323 aa29.26■■■□□ 2.27
U2AF1-208ENST00000471250 FAM86B1E9PN63 330 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 FAM86B2P0C5J1 330 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 MTRQ99707 1265 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 LOC285556D6RIA3 1793 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 CXCL11O14625 94 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 GTPBP6O43824 516 aaPredicted RBP29.25■■■□□ 2.27
U2AF1-208ENST00000471250 ZNF76P36508 570 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 CALML4Q96GE6 196 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 TRERF1Q96PN7 1200 aa29.25■■■□□ 2.27
U2AF1-208ENST00000471250 A0A0G2JLL6 359 aaPredicted RBP29.24■■■□□ 2.27
U2AF1-208ENST00000471250 ATP2A1O14983 1001 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 PLCG1P19174 1290 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 MORC3Q14149 939 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 PRRT2Q7Z6L0 340 aaPredicted RBP29.24■■■□□ 2.27
U2AF1-208ENST00000471250 DHX40Q8IX18 779 aaKnown RBP29.24■■■□□ 2.27
U2AF1-208ENST00000471250 OTUD5Q96G74 571 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 PDLIM2Q96JY6 352 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 MAGEF1Q9HAY2 307 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 RABGAP1Q9Y3P9 1069 aa29.24■■■□□ 2.27
U2AF1-208ENST00000471250 POTEMA6NI47 508 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 IRF6O14896 467 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 POTEIP0CG38 1075 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 POTEJP0CG39 1038 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 GJA10Q969M2 543 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 FAM20AQ96MK3 541 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 GSDMAQ96QA5 445 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 RPTORQ8N122 1335 aa29.23■■■□□ 2.27
U2AF1-208ENST00000471250 SPDYE16A6NNV3 312 aaPredicted RBP29.22■■■□□ 2.27
U2AF1-208ENST00000471250 BMP6P22004 513 aa29.22■■■□□ 2.27
U2AF1-208ENST00000471250 PPIL2Q13356 520 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms