RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 GTF2IP78347 998 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
CHD3-208ENST00000470531 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 SGMS1Q86VZ5 419 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
CHD3-208ENST00000470531 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 XDHP47989 1333 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 MAP2K7O14733 419 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 OR52Z1P0C646 297 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 MEX3CQ5U5Q3 659 aaKnown RBP11.83□□□□□ -0.52
CHD3-208ENST00000470531 CAPN12Q6ZSI9 719 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
CHD3-208ENST00000470531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■■□ 21
CHD3-208ENST00000470531 L1RE1Q9UN81 338 aa11.83□□□□□ -0.52
CHD3-208ENST00000470531 MEGF6O75095 1541 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 CPDO75976 1380 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 GNA11P29992 359 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 KIF11P52732 1056 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 GUCY1A3Q02108 690 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 TBX2Q13207 712 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 STAG1Q8WVM7 1258 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 P2RX5Q93086 422 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 DMGDHQ9UI17 866 aaKnown RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 OPA1O60313 960 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 CYP19A1P11511 503 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 MMP14P50281 582 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 TPTE2Q6XPS3 522 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 BRINP3Q76B58 766 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 DDX42Q86XP3 938 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD3-208ENST00000470531 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 FAM71BQ8TC56 605 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 DCP1AQ9NPI6 582 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 GGT7Q9UJ14 662 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 PIK3C2AO00443 1686 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 LRRN2O75325 713 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 TDP2O95551 362 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 KRT71Q3SY84 523 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 CNNM4Q6P4Q7 775 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 DPP8Q6V1X1 898 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 TXNRD3Q86VQ6 643 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 THOC1Q96FV9 657 aaKnown RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 TACO1Q9BSH4 297 aaKnown RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 MLXIPLQ9NP71 852 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
CHD3-208ENST00000470531 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
CHD3-208ENST00000470531 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 VIMP08670 466 aaKnown RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 SEC24CP53992 1094 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 TBC1D31Q96DN5 1066 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 SUFUQ9UMX1 484 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 FGFR1OPO95684 399 aaKnown RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 CYP2J2P51589 502 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 PRR16Q569H4 304 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 RNF217Q8TC41 542 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 TAL1P17542 331 aaPredicted RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 GNAQP50148 359 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 SFMBT2Q5VUG0 894 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 KCNK9Q9NPC2 374 aa11.81□□□□□ -0.52
CHD3-208ENST00000470531 ARPP21Q9UBL0 812 aaPredicted RBP11.81□□□□□ -0.52
CHD3-208ENST00000470531 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 GCNT3O95395 438 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 CTNNA1P35221 906 aaKnown RBP11.8□□□□□ -0.52
CHD3-208ENST00000470531 COPB2P35606 906 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 SLC1A4P43007 532 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 NNTQ13423 1086 aa11.8□□□□□ -0.52
CHD3-208ENST00000470531 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
CHD3-208ENST00000470531 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms