RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.79■□□□□ 0.12
LINC00173-201ENST00000470091 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 MROH7Q68CQ1 1323 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-201ENST00000470091 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-201ENST00000470091 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
LINC00173-201ENST00000470091 CSF2RAP15509 400 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 CYP2C18P33260 490 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 STK3Q13188 491 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 FSCN1Q16658 493 aaKnown RBP15.78■□□□□ 0.12
LINC00173-201ENST00000470091 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 C16orf59Q7L2K0 433 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
LINC00173-201ENST00000470091 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-201ENST00000470091 GRXCR1A8MXD5 290 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 ICAM1P05362 532 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 FGRP09769 529 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
LINC00173-201ENST00000470091 PCP11498 1178 aaKnown RBP15.77■□□□□ 0.12
LINC00173-201ENST00000470091 FOSL2P15408 326 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00173-201ENST00000470091 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 FBXL16Q8N461 479 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 ESR2Q92731 530 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 COL25A1Q9BXS0 654 aaPredicted RBP15.77■□□□□ 0.12
LINC00173-201ENST00000470091 ZSWIM5Q9P217 1185 aa15.77■□□□□ 0.12
LINC00173-201ENST00000470091 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
LINC00173-201ENST00000470091 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 NFIBO00712 420 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 DNAJB2P25686 324 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 NOVP48745 357 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 PSMC6P62333 389 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 TMEM67Q5HYA8 995 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 TMEM240Q5SV17 173 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 FAM126BQ8IXS8 530 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 TMEM199Q8N511 208 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 INTS4Q96HW7 963 aaKnown RBP15.76■□□□□ 0.11
LINC00173-201ENST00000470091 TMEM87BQ96K49 555 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 TRPV6Q9H1D0 765 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 RANBP17Q9H2T7 1088 aaKnown RBP15.76■□□□□ 0.11
LINC00173-201ENST00000470091 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
LINC00173-201ENST00000470091 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
LINC00173-201ENST00000470091 GRIN2DO15399 1336 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 KLF18A0A0U1RQI7 1052 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 GOLGA8BA8MQT2 603 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 IFIT3O14879 490 aaKnown RBP15.75■□□□□ 0.11
LINC00173-201ENST00000470091 ZEB2O60315 1214 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 CALML3P27482 149 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 GTF3C6Q969F1 213 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 LY9Q9HBG7 655 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 BRPF3Q9ULD4 1205 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 MYO9BQ13459 2157 aa15.75■□□□□ 0.11
LINC00173-201ENST00000470091 PFKFB2O60825 505 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 DTNBO60941 627 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 CABYRO75952 493 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 CD4P01730 458 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 PBX2P40425 430 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 CCL23P55773 120 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 NKX3-2P78367 333 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 IGDCC4Q8TDY8 1250 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 UBAC1Q9BSL1 405 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 VTA1Q9NP79 307 aa15.74■□□□□ 0.11
LINC00173-201ENST00000470091 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
LINC00173-201ENST00000470091 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
LINC00173-201ENST00000470091 UMODL1Q5DID0 1318 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 GOLGA8HP0CJ92 632 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 PDHBP11177 359 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 PDIA3P30101 505 aaKnown RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 ALDH5A1P51649 535 aaPredicted RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 EVCP57679 992 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 SCRN1Q12765 414 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 WTAPQ15007 396 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 TIFAQ96CG3 184 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 ZNF274Q96GC6 653 aaPredicted RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 UBA5Q9GZZ9 404 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 ZNF576Q9H609 170 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 IL23AQ9NPF7 189 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
LINC00173-201ENST00000470091 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.73■□□□□ 0.11
LINC00173-201ENST00000470091 TNKSO95271 1327 aa15.72■□□□□ 0.11
LINC00173-201ENST00000470091 FGBP02675 491 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms