RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 DENND4AQ7Z401 1863 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 MAGEB6P1A0A0J9YX57 407 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 MED19A0JLT2 244 aaPredicted RBP9.9□□□□□ -0.82
LSM2-210ENST00000470086 LINC01565O15544 149 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 GJB5O95377 273 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 PDGFBP01127 241 aaPredicted RBP9.9□□□□□ -0.82
LSM2-210ENST00000470086 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 MUM1L1Q5H9M0 696 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSM2-210ENST00000470086 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
LSM2-210ENST00000470086 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 ANKRD35Q8N283 1001 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 COPS5Q92905 334 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 TGS1Q96RS0 853 aaKnown RBP9.9□□□□□ -0.82
LSM2-210ENST00000470086 FTOQ9C0B1 505 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSM2-210ENST00000470086 SLC38A10Q9HBR0 1119 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 EPG5Q9HCE0 2579 aa9.9□□□□□ -0.82
LSM2-210ENST00000470086 ZBED9Q6R2W3 1325 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 ZNF532Q9HCE3 1301 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 TMEM221A6NGB7 291 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 M0R296 226 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 ATP2A1O14983 1001 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 MBTPS2O43462 519 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 LGR5O75473 907 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 CABYRO75952 493 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 CSPG5O95196 566 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 SNAP25P60880 206 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 CCDC158Q5M9N0 1113 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 C16orf86Q6ZW13 317 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 KIFC2Q96AC6 838 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 CHMP4CQ96CF2 233 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
LSM2-210ENST00000470086 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 C1orf115Q9H7X2 142 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 GPR108Q9NPR9 543 aa9.89□□□□□ -0.83
LSM2-210ENST00000470086 RIF1Q5UIP0 2472 aaKnown RBP9.89□□□□□ -0.83
LSM2-210ENST00000470086 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 PRR23AA6NEV1 266 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 BAIAP3O94812 1187 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 MYL3P08590 195 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 ACTN1P12814 892 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 COPB2P35606 906 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 SMAD2Q15796 467 aaKnown RBP9.88□□□□□ -0.83
LSM2-210ENST00000470086 C12orf60Q5U649 245 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 EP400NLQ6ZTU2 488 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 MRPL38Q96DV4 380 aaKnown RBP9.88□□□□□ -0.83
LSM2-210ENST00000470086 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 CLDND1Q9NY35 253 aa9.88□□□□□ -0.83
LSM2-210ENST00000470086 E9PSI1 815 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 H0Y858 1186 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 MBD4O95243 580 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 CXCL10P02778 98 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 RFC2P35250 354 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 KCNJ6P48051 423 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 G3BP1Q13283 466 aaKnown RBP eCLIP9.87□□□□□ -0.83
LSM2-210ENST00000470086 HIC1Q14526 733 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
LSM2-210ENST00000470086 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 BMP8AQ7Z5Y6 402 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 LRRC47Q8N1G4 583 aaKnown RBP9.87□□□□□ -0.83
LSM2-210ENST00000470086 EDAQ92838 391 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 ASIC4Q96FT7 647 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 CRNKL1Q9BZJ0 848 aaKnown RBP9.87□□□□□ -0.83
LSM2-210ENST00000470086 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 TLR9Q9NR96 1032 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 RNF146Q9NTX7 359 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 MYO10Q9HD67 2058 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
LSM2-210ENST00000470086 IGKV6D-41A0A0C4DH26 115 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 KIF28PB7ZC32 967 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 F5H6K3 240 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 BCAR3O75815 825 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 ARIH2O95376 493 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 RASA1P20936 1047 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 MAP1BP46821 2468 aaKnown RBP9.86□□□□□ -0.83
LSM2-210ENST00000470086 FOXK2Q01167 660 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 KLRC3Q07444 240 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 HYAL1Q12794 435 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 CTC1Q2NKJ3 1217 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 FNDC1Q4ZHG4 1894 aaPredicted RBP9.86□□□□□ -0.83
LSM2-210ENST00000470086 EPC2Q52LR7 807 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 AP5M1Q9H0R1 490 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
LSM2-210ENST00000470086 BAHCC1Q9P281 2608 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms