RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 CMTR1Q8N1G2 835 aaKnown RBP14.56□□□□□ -0.08
ABCF1-204ENST00000468958 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 LRCH3Q96II8 777 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 WDR11Q9BZH6 1224 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
ABCF1-204ENST00000468958 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 PQBP1O60828 265 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 CFBP00751 764 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 FGD1P98174 961 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 EXOSC10Q01780 885 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 PDE4DQ08499 809 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 BLOC1S2Q6QNY1 142 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 DHX32Q7L7V1 743 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 CATIPQ7Z7H3 387 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 PIBF1Q8WXW3 757 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
ABCF1-204ENST00000468958 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
ABCF1-204ENST00000468958 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 A0A1W2PPC1 479 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 DDAH1O94760 285 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 CALM1P0DP23 149 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 CALM2P0DP24 149 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 CALM3P0DP25 149 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 CPA1P15085 419 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 EIF2AK2P19525 551 aaKnown RBP14.54□□□□□ -0.08
ABCF1-204ENST00000468958 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
ABCF1-204ENST00000468958 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
ABCF1-204ENST00000468958 PCSK9Q8NBP7 692 aaKnown RBP14.54□□□□□ -0.08
ABCF1-204ENST00000468958 IL31RAQ8NI17 732 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 PPP1R13LQ8WUF5 828 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 BADQ92934 168 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 GLT1D1Q96MS3 346 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 MAP3K14Q99558 947 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 UBE2OQ9C0C9 1292 aaKnown RBP14.54□□□□□ -0.08
ABCF1-204ENST00000468958 PXMP2Q9NR77 195 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 SNX14Q9Y5W7 946 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 ELP1O95163 1332 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 GBF1Q92538 1859 aa14.54□□□□□ -0.08
ABCF1-204ENST00000468958 PNMA6FA0A0J9YX94 578 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 CCDC69A6NI79 296 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 CLTBP09497 229 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 LIFRP42702 1097 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 EPHB4P54760 987 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 PSMC6P62333 389 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 C8orf34Q49A92 452 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 CCDC62Q6P9F0 684 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 NFXL1Q6ZNB6 911 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 FAM126BQ8IXS8 530 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 TDHQ8IZJ6 230 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 SLC43A3Q8NBI5 491 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 ZFP91Q96JP5 570 aaPredicted RBP14.53□□□□□ -0.08
ABCF1-204ENST00000468958 JAKMIP1Q96N16 626 aaKnown RBP14.53□□□□□ -0.08
ABCF1-204ENST00000468958 RMDN3Q96TC7 470 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 SPZ1Q9BXG8 430 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 TM6SF1Q9BZW5 370 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 SPC25Q9HBM1 224 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 BRPF3Q9ULD4 1205 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 Q9Y3F1 56 aa14.53□□□□□ -0.08
ABCF1-204ENST00000468958 TANC1Q9C0D5 1861 aa14.52□□□□□ -0.08
ABCF1-204ENST00000468958 A0A0U1RQG5 324 aaPredicted RBP14.52□□□□□ -0.09
ABCF1-204ENST00000468958 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 ARVCFO00192 962 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 KIAA0355O15063 1070 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 RGS20O76081 388 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 KIF5BP33176 963 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 C9orf50Q5SZB4 431 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 SGMS1Q86VZ5 419 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 OR6J1Q8NGC5 347 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 NSUN6Q8TEA1 469 aaKnown RBP14.52□□□□□ -0.09
ABCF1-204ENST00000468958 TOX2Q96NM4 488 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 MAF1Q9H063 256 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 AP5M1Q9H0R1 490 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 TBX21Q9UL17 535 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 CYP46A1Q9Y6A2 500 aa14.52□□□□□ -0.09
ABCF1-204ENST00000468958 TRIP12Q14669 1992 aaPredicted RBP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 CD4P01730 458 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 TXNP10599 105 aaKnown RBP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 PURAQ00577 322 aaKnown RBP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 LY6KQ17RY6 165 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 ARHGEF16Q5VV41 709 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 SEPT14Q6ZU15 432 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 CTCFLQ8NI51 663 aaPredicted RBP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 SCFD2Q8WU76 684 aa14.51□□□□□ -0.09
ABCF1-204ENST00000468958 GPKOWQ92917 476 aaPredicted RBP eCLIP14.51□□□□□ -0.09
ABCF1-204ENST00000468958 PDCD2LQ9BRP1 358 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms