RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LILRB2Q8N423 598 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 PLEKHO2Q8TD55 490 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 BTG4Q9NY30 223 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 TIMM13Q9Y5L4 95 aaPredicted RBP8.2□□□□□ -1.1
XRN1-207ENST00000468894 TRBV23-1A0A0A0MS06 115 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 MSCO60682 206 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 FUCA1P04066 466 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 BCL6P41182 706 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 TXKP42681 527 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 LONRF2Q1L5Z9 754 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 WWC2Q6AWC2 1192 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 PAQR3Q6TCH7 311 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 MRFAP1L1Q96HT8 127 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 CDC6Q99741 560 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 GPR27Q9NS67 375 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 USP35Q9P2H5 1018 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 PCDHA2Q9Y5H9 948 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 HCFC2Q9Y5Z7 792 aa8.19□□□□□ -1.1
XRN1-207ENST00000468894 MYO1BO43795 1136 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 NR1I3Q14994 352 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 C2orf27AQ580R0 203 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 KCNT2Q6UVM3 1135 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
XRN1-207ENST00000468894 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 CABP7Q86V35 215 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 SCUBE1Q8IWY4 988 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 NETO2Q8NC67 525 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 THAP3Q8WTV1 239 aaPredicted RBP8.18□□□□□ -1.1
XRN1-207ENST00000468894 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 RXFP1Q9HBX9 757 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 PTCH2Q9Y6C5 1203 aa8.18□□□□□ -1.1
XRN1-207ENST00000468894 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 C22orf46C9J442 243 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 ABLIM1O14639 778 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 KRT1P04264 644 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 C6orf222P0C671 652 aaPredicted RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 MAPKAPK2P49137 400 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 GTF2A2P52657 109 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 STYK1Q6J9G0 422 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 RSPO2Q6UXX9 243 aaPredicted RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 USP33Q8TEY7 942 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 DCAF4Q8WV16 495 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 KISS1RQ969F8 398 aaPredicted RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 GCM1Q9NP62 436 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 MBD1Q9UIS9 605 aaPredicted RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 MRPS23Q9Y3D9 190 aaKnown RBP8.17□□□□□ -1.1
XRN1-207ENST00000468894 ASXL2Q76L83 1435 aa8.17□□□□□ -1.1
XRN1-207ENST00000468894 ZC3H12DA2A288 527 aaKnown RBP8.16□□□□□ -1.1
XRN1-207ENST00000468894 SEMA7AO75326 666 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 NTRK1P04629 796 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 RBM10P98175 930 aaKnown RBP8.16□□□□□ -1.1
XRN1-207ENST00000468894 TMEM62Q0P6H9 643 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 CEP68Q76N32 757 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 DHRS4Q9BTZ2 278 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 X6R8D5 127 aa8.16□□□□□ -1.1
XRN1-207ENST00000468894 F8W031 263 aaPredicted RBP8.15□□□□□ -1.1
XRN1-207ENST00000468894 C8AP07357 584 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 LSAMPQ13449 338 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 OLFML2BQ68BL8 750 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 ZC3H14Q6PJT7 736 aaKnown RBP8.15□□□□□ -1.1
XRN1-207ENST00000468894 RIOX2Q8IUF8 465 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 ZSWIM2Q8NEG5 633 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 TMEM169Q96HH4 297 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 SGPP1Q9BX95 441 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 CNTD2Q9H8S5 307 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
XRN1-207ENST00000468894 PPARGC1AQ9UBK2 798 aaKnown RBP8.15□□□□□ -1.1
XRN1-207ENST00000468894 ETV2O00321 342 aaPredicted RBP8.14□□□□□ -1.11
XRN1-207ENST00000468894 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 PRR5P85299 388 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 ZC3H12BQ5HYM0 836 aaKnown RBP8.14□□□□□ -1.11
XRN1-207ENST00000468894 LBX2Q6XYB7 198 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 TRMT2BQ96GJ1 504 aaKnown RBP8.14□□□□□ -1.11
XRN1-207ENST00000468894 PPP1R16BQ96T49 567 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 SLC38A3Q99624 504 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 ZFYVE21Q9BQ24 234 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 CLDND1Q9NY35 253 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 SIT1Q9Y3P8 196 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 TRAF6Q9Y4K3 522 aa8.14□□□□□ -1.11
XRN1-207ENST00000468894 H7BY64 318 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 TSPAN15O95858 294 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 FBLN1P23142 703 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 GLDCP23378 1020 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 CDR1P51861 262 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 EPHB3P54753 998 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 GPR85P60893 370 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 DLG4P78352 724 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 ZNF200P98182 395 aaPredicted RBP8.13□□□□□ -1.11
XRN1-207ENST00000468894 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 MROH9Q5TGP6 573 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 DCP2Q8IU60 420 aaKnown RBP8.13□□□□□ -1.11
XRN1-207ENST00000468894 BHLHE22Q8NFJ8 381 aaPredicted RBP8.13□□□□□ -1.11
XRN1-207ENST00000468894 SH3TC2Q8TF17 1288 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms