RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DPY19L1Q2PZI1 675 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 CNKSR3Q6P9H4 555 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 FAM129CQ86XR2 697 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 SH3TC2Q8TF17 1288 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 HCFC2Q9Y5Z7 792 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 BUB1BO60566 1050 aaPredicted RBP7.51□□□□□ -1.21
LSM5-209ENST00000468872 TRIM13O60858 407 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 HOXA5P20719 270 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 AMPD2Q01433 879 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 GRB10Q13322 594 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 EGFLAMQ63HQ2 1017 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 MARCH10Q8NA82 808 aaPredicted RBP7.51□□□□□ -1.21
LSM5-209ENST00000468872 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
LSM5-209ENST00000468872 KCNC2Q96PR1 638 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 ZCCHC4Q9H5U6 513 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 BACE2Q9Y5Z0 518 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
LSM5-209ENST00000468872 ANKRD34BA5PLL1 514 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 C2orf71A6NGG8 1288 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 ENPP3O14638 875 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 SEPHS1P49903 392 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 SSRP1Q08945 709 aaKnown RBP7.5□□□□□ -1.21
LSM5-209ENST00000468872 ZNF513Q8N8E2 541 aaPredicted RBP7.5□□□□□ -1.21
LSM5-209ENST00000468872 JMYQ8N9B5 988 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 APEX2Q9UBZ4 518 aa7.5□□□□□ -1.21
LSM5-209ENST00000468872 IGFBP6P24592 240 aaPredicted RBP7.49□□□□□ -1.21
LSM5-209ENST00000468872 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
LSM5-209ENST00000468872 SQSTM1Q13501 440 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 C2orf27AQ580R0 203 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 ZNF662Q6ZS27 426 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 C20orf173Q96LM9 149 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 PWWP2AQ96N64 755 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 EPN3Q9H201 632 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
LSM5-209ENST00000468872 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
LSM5-209ENST00000468872 GLI4P10075 376 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 PFKLP17858 780 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 FBLN1P23142 703 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 HSD3B2P26439 372 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 CTSWP56202 376 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 PRR5P85299 388 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 VMACQ2NL98 169 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
LSM5-209ENST00000468872 SPATA9Q9BWV2 254 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 KRTAP4-9Q9BYQ8 210 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 AKT3Q9Y243 479 aa7.48□□□□□ -1.21
LSM5-209ENST00000468872 ZC3H12DA2A288 527 aaKnown RBP7.47□□□□□ -1.21
LSM5-209ENST00000468872 TARBP2Q15633 366 aaKnown RBP7.47□□□□□ -1.21
LSM5-209ENST00000468872 CPNE8Q86YQ8 564 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 APBA2Q99767 749 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 FBLN5Q9UBX5 448 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 DBR1Q9UK59 544 aaKnown RBP7.47□□□□□ -1.21
LSM5-209ENST00000468872 EMC9Q9Y3B6 208 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 RWDD3Q9Y3V2 267 aa7.47□□□□□ -1.21
LSM5-209ENST00000468872 NPHP3-ACAD11A0A0J9YXS1 232 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 ADCY3O60266 1144 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
LSM5-209ENST00000468872 KCNH1O95259 989 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 FAM153BP0C7A2 387 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 NAT2P11245 290 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 PAMP19021 973 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 LIMS1P48059 325 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 SV2CQ496J9 727 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 LZTR1Q8N653 840 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 BVESQ8NE79 360 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 PTCH2Q9Y6C5 1203 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.22
LSM5-209ENST00000468872 TRBV23OR9-2A0A075B6M9 112 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 A0A0G2JLL6 359 aaPredicted RBP7.45□□□□□ -1.22
LSM5-209ENST00000468872 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 CDC45O75419 566 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 CABP7Q86V35 215 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 LINC01356Q8N9X3 169 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 LGR4Q9BXB1 951 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 RXFP1Q9HBX9 757 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 GULP1Q9UBP9 304 aa7.45□□□□□ -1.22
LSM5-209ENST00000468872 SASH1O94885 1247 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 ATF2P15336 505 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 PLEKHG4Q58EX7 1191 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 LRRC47Q8N1G4 583 aaKnown RBP7.44□□□□□ -1.22
LSM5-209ENST00000468872 CRACR2BQ8N4Y2 399 aaPredicted RBP7.44□□□□□ -1.22
LSM5-209ENST00000468872 ZBTB38Q8NAP3 1195 aaPredicted RBP7.44□□□□□ -1.22
LSM5-209ENST00000468872 APPBP2Q92624 585 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 COPS5Q92905 334 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 SGSM3Q96HU1 749 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 RNF38Q9H0F5 515 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 XYLT2Q9H1B5 865 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 CLEC1BQ9P126 229 aa7.44□□□□□ -1.22
LSM5-209ENST00000468872 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.44□□□□□ -1.22
LSM5-209ENST00000468872 ADAMTS20P59510 1910 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms