RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 GLI4P10075 376 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 PI3P19957 117 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 GFRA1P56159 465 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 PRR5P85299 388 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 PPIL6Q8IXY8 311 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 KREMEN2Q8NCW0 462 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 DIO2Q92813 273 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 SIT1Q9Y3P8 196 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 KCTD3Q9Y597 815 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 IRAK3Q9Y616 596 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 CPP00450 1065 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 SCG5P05408 212 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 LCP1P13796 627 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 DENND5AQ6IQ26 1287 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 IGDCC3Q8IVU1 814 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 ZSCAN18Q8TBC5 510 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-207ENST00000468723 SIGLEC10Q96LC7 697 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 CCDC140Q96MF4 163 aa6.05□□□□□ -1.44
GPNMB-207ENST00000468723 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.05□□□□□ -1.44
GPNMB-207ENST00000468723 C22orf46C9J442 243 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 BUB1BO60566 1050 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-207ENST00000468723 CAPNS1P04632 268 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 ZSCAN22P10073 491 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-207ENST00000468723 FPR2P25090 351 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 BCL6P41182 706 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 E4F1Q66K89 784 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-207ENST00000468723 WWC2Q6AWC2 1192 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 IQCEQ6IPM2 695 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 CEP68Q76N32 757 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 PLEKHO2Q8TD55 490 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 CHAMP1Q96JM3 812 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 PCDHA5Q9Y5H7 936 aa6.04□□□□□ -1.44
GPNMB-207ENST00000468723 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-207ENST00000468723 PRODHO43272 600 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
GPNMB-207ENST00000468723 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-207ENST00000468723 ZNF385BQ569K4 471 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 LCNL1Q6ZST4 164 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 TMEFF1Q8IYR6 380 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 RCBTB1Q8NDN9 531 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 ST13P5Q8NFI4 369 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-207ENST00000468723 KCTD13Q8WZ19 329 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 ALG3Q92685 438 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
GPNMB-207ENST00000468723 EPB41L4AQ9HCS5 686 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-207ENST00000468723 PFDN2Q9UHV9 154 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 FBXL7Q9UJT9 491 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 PCDHA2Q9Y5H9 948 aa6.03□□□□□ -1.44
GPNMB-207ENST00000468723 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 PDPK1O15530 556 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 DLX3O60479 287 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 LTBRP36941 435 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 LIMS1P48059 325 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 KCNAB2Q13303 367 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 VMACQ2NL98 169 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 SLC35F1Q5T1Q4 408 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
GPNMB-207ENST00000468723 USP53Q70EK8 1073 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 NETO2Q8NC67 525 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 PMFBP1Q8TBY8 1022 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 TRMT2BQ96GJ1 504 aaKnown RBP6.02□□□□□ -1.45
GPNMB-207ENST00000468723 PEX11GQ96HA9 241 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 SGSM3Q96HU1 749 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 HIRIP3Q9BW71 556 aaPredicted RBP6.02□□□□□ -1.45
GPNMB-207ENST00000468723 ARHGEF4Q9NR80 690 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 NUDT5Q9UKK9 219 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 MSRB2Q9Y3D2 182 aa6.02□□□□□ -1.45
GPNMB-207ENST00000468723 IRS2Q9Y4H2 1338 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 RFXAPO00287 272 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 IRS4O14654 1257 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-207ENST00000468723 MYO1BO43795 1136 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 ATF2P15336 505 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 PFKLP17858 780 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 MC3RP41968 323 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 MAP4K2Q12851 820 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 MTERF2Q49AM1 385 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 ACBD5Q5T8D3 534 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-207ENST00000468723 CNKSR3Q6P9H4 555 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 NLRP10Q86W26 655 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 TMEM169Q96HH4 297 aa6.01□□□□□ -1.45
GPNMB-207ENST00000468723 TRAV20A0A0B4J274 112 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 BLACEA4D250 179 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 ASGR2P07307 311 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 PABPC1P11940 636 aaKnown RBP6□□□□□ -1.45
GPNMB-207ENST00000468723 PMLP29590 882 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 LSAMPQ13449 338 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
GPNMB-207ENST00000468723 LCE1DQ5T752 114 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 NSMFQ6X4W1 530 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 SPOCD1Q6ZMY3 1216 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 FAM129CQ86XR2 697 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 LRRC47Q8N1G4 583 aaKnown RBP6□□□□□ -1.45
GPNMB-207ENST00000468723 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 CLDND1Q9NY35 253 aa6□□□□□ -1.45
GPNMB-207ENST00000468723 SIRPGQ9P1W8 387 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms