RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PSMD2Q13200 908 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 TKFCQ3LXA3 575 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 ANGEL2Q5VTE6 544 aaKnown RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 NOC3LQ8WTT2 800 aaKnown RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 KIFC2Q96AC6 838 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 PPP1R9AQ9ULJ8 1098 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 USP17L15C9J2P7 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L11C9JVI0 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L18D6R9N7 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L22D6RA61 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L19D6RCP7 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L20D6RJB6 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 SLC37A4O43826 429 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 PPP1R12BO60237 982 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 KIF20AO95235 890 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 PRR29P0C7W0 189 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 PLCG1P19174 1290 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 ZNF76P36508 570 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L24Q0WX57 530 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USH1GQ495M9 461 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 NAALADL2Q58DX5 795 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 NBPF12Q5TAG4 269 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP17L6PQ6QN14 398 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 LDHDQ86WU2 507 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 DCPSQ96C86 337 aaKnown RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 KLRG1Q96E93 195 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
MSH5-213ENST00000468136 WRNIP1Q96S55 665 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 SLC38A10Q9HBR0 1119 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 GGA3Q9NZ52 723 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
MSH5-213ENST00000468136 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 BICDL2A1A5D9 508 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 UNCXA6NJT0 531 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 PSMA7O14818 248 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 ATP2A1O14983 1001 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 FOXN1O15353 648 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 EDIL3O43854 480 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 EGFRP00533 1210 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 SERPINC1P01008 464 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 BCRP11274 1271 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 PTPRAP18433 802 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 BMP6P22004 513 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 NF2P35240 595 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 HSD17B4P51659 736 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 FANCCQ00597 558 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 CUL4BQ13620 913 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 FILIP1LQ4L180 1135 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 CCDC150Q8NCX0 1101 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 LARP4BQ92615 738 aaKnown RBP11.43□□□□□ -0.58
MSH5-213ENST00000468136 HAS1Q92839 578 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 WDR11Q9BZH6 1224 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 EXOC1Q9NV70 894 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
MSH5-213ENST00000468136 SYNRGQ9UMZ2 1314 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 AP5Z1O43299 807 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 GRIN3BO60391 1043 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 FGFR1OPO95684 399 aaKnown RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 ZNF18P17022 549 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 VCAM1P19320 739 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 UBASH3AP57075 661 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 PAK1Q13153 545 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 TPD52L1Q16890 204 aaPredicted RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 UNC13DQ70J99 1090 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 ETNPPLQ8TBG4 499 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 RAD54LQ92698 747 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
MSH5-213ENST00000468136 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 NFE2L3Q9Y4A8 694 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 DOCK1Q14185 1865 aa11.42□□□□□ -0.58
MSH5-213ENST00000468136 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms