RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 MICU3Q86XE3 530 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 WDR11Q9BZH6 1224 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 SPC25Q9HBM1 224 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 PXMP2Q9NR77 195 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-215ENST00000468018 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 B4DLN1 442 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 CPA1P15085 419 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 MRPL12P52815 198 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 FUT2Q10981 343 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 HABP4Q5JVS0 413 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 CCDC62Q6P9F0 684 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 SCFD2Q8WU76 684 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
ATG4B-215ENST00000468018 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
ATG4B-215ENST00000468018 NKRFO15226 690 aaKnown RBP eCLIP17.54■□□□□ 0.49e-11■■□□□ 11.5
ATG4B-215ENST00000468018 ARIH2O95376 493 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 SYN1P17600 705 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 BMP8BP34820 402 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 BEX3Q00994 111 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 FSCN1Q16658 493 aaKnown RBP17.54■□□□□ 0.4
ATG4B-215ENST00000468018 GNASQ5JWF2 1037 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 BLOC1S2Q6QNY1 142 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 TOX2Q96NM4 488 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 STARD7Q9NQZ5 370 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 RBM28Q9NW13 759 aaKnown RBP17.54■□□□□ 0.4
ATG4B-215ENST00000468018 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
ATG4B-215ENST00000468018 DOCK5Q9H7D0 1870 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 A0A1W2PPC1 479 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 GCOM1H8Y6P7 765 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-215ENST00000468018 PIK3CDO00329 1044 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 DYNC1LI2O43237 492 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-215ENST00000468018 ZBTB43O43298 467 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 NR3C2P08235 984 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 POLR2MP0CAP2 368 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-215ENST00000468018 CDK7P50613 346 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 EVCP57679 992 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 STXBP2Q15833 593 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 Q6ZUG5 572 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 GLT1D1Q96MS3 346 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
ATG4B-215ENST00000468018 KLF18A0A0U1RQI7 1052 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 MEIS2O14770 477 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
ATG4B-215ENST00000468018 RGS20O76081 388 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 EIF2AK2P19525 551 aaKnown RBP17.52■□□□□ 0.4
ATG4B-215ENST00000468018 PSMA5P28066 241 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 CDC27P30260 824 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.4
ATG4B-215ENST00000468018 PGM5Q15124 567 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 PPP2R5BQ15173 497 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 ARHGEF16Q5VV41 709 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
ATG4B-215ENST00000468018 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
ATG4B-215ENST00000468018 ATP11BQ9Y2G3 1177 aa17.52■□□□□ 0.4
ATG4B-215ENST00000468018 CABYRO75952 493 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 TLE2Q04725 743 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 RTN1Q16799 776 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 AP5M1Q9H0R1 490 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
ATG4B-215ENST00000468018 GRIN2DO15399 1336 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-215ENST00000468018 A6NJR5 290 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 ARVCFO00192 962 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 TXNP10599 105 aaKnown RBP17.5■□□□□ 0.39
ATG4B-215ENST00000468018 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
ATG4B-215ENST00000468018 APOBRQ0VD83 1088 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 CXCL17Q6UXB2 119 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 COPS5Q92905 334 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 BRF1Q92994 677 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 IL17RAQ96F46 866 aa17.5■□□□□ 0.39
ATG4B-215ENST00000468018 DDX41Q9UJV9 622 aaKnown RBP17.5■□□□□ 0.39
ATG4B-215ENST00000468018 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 TRIM43BA6NCK2 446 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 GOLGA8AA7E2F4 631 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 ZEB2O60315 1214 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 ARHGAP1Q07960 439 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 FAAP100Q0VG06 881 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms