RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 TOX2Q96NM4 488 aa22.55■■□□□ 1.2
GMDS-203ENST00000467288 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
GMDS-203ENST00000467288 MAP3K20Q9NYL2 800 aaKnown RBP22.55■■□□□ 1.2
GMDS-203ENST00000467288 CCDC69A6NI79 296 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 CFBP00751 764 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 CDK7P50613 346 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 NFXL1Q6ZNB6 911 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 SH3RF1Q7Z6J0 888 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 RASEFQ8IZ41 740 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 IWS1Q96ST2 819 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 RMDN3Q96TC7 470 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 SPZ1Q9BXG8 430 aa22.54■■□□□ 1.2
GMDS-203ENST00000467288 PRDM5Q9NQX1 630 aaPredicted RBP22.54■■□□□ 1.2
GMDS-203ENST00000467288 LTBP2Q14767 1821 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 TRIM43BA6NCK2 446 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 PQBP1O60828 265 aaKnown RBP22.53■■□□□ 1.2
GMDS-203ENST00000467288 CLTBP09497 229 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 SGMS1Q86VZ5 419 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 SCFD2Q8WU76 684 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 TRIM43Q96BQ3 446 aaPredicted RBP22.53■■□□□ 1.2
GMDS-203ENST00000467288 LZTS2Q9BRK4 669 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 LRRC2Q9BYS8 371 aa22.53■■□□□ 1.2
GMDS-203ENST00000467288 A0A0U1RQG5 324 aaPredicted RBP22.52■■□□□ 1.2
GMDS-203ENST00000467288 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 NKRFO15226 690 aaKnown RBP eCLIP22.52■■□□□ 1.2
GMDS-203ENST00000467288 ZEB2O60315 1214 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 CABYRO75952 493 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 CALM1P0DP23 149 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 CALM2P0DP24 149 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 CALM3P0DP25 149 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 GNAQP50148 359 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 EXOSC10Q01780 885 aaKnown RBP22.52■■□□□ 1.2
GMDS-203ENST00000467288 FAAP100Q0VG06 881 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 ADCK5Q3MIX3 580 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 ERICH6BQ5W0A0 696 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 VTI1AQ96AJ9 217 aa22.52■■□□□ 1.2
GMDS-203ENST00000467288 BAZ2BQ9UIF8 2168 aaKnown RBP22.51■■□□□ 1.19
GMDS-203ENST00000467288 ARVCFO00192 962 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 KRT32Q14532 448 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 PPP2R5BQ15173 497 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 ARHGEF16Q5VV41 709 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 DHX32Q7L7V1 743 aaKnown RBP22.51■■□□□ 1.19
GMDS-203ENST00000467288 SLC43A3Q8NBI5 491 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 KCNB2Q92953 911 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 PXMP2Q9NR77 195 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 SLC12A7Q9Y666 1083 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 MROH7Q68CQ1 1323 aa22.51■■□□□ 1.19
GMDS-203ENST00000467288 DCDC2CA8MYV0 355 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 PLEKHA8P1O95397 391 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 STXBP2Q15833 593 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 FAM109BQ6ICB4 259 aaPredicted RBP22.5■■□□□ 1.19
GMDS-203ENST00000467288 CCDC62Q6P9F0 684 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 SRBD1Q8N5C6 995 aaKnown RBP22.5■■□□□ 1.19
GMDS-203ENST00000467288 OR6J1Q8NGC5 347 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
GMDS-203ENST00000467288 LAMA2P24043 3122 aaKnown RBP22.49■■□□□ 1.19
GMDS-203ENST00000467288 CUL9Q8IWT3 2517 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 ARIH2O95376 493 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 NR3C2P08235 984 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 TXNP10599 105 aaKnown RBP22.49■■□□□ 1.19
GMDS-203ENST00000467288 EIF2AK2P19525 551 aaKnown RBP22.49■■□□□ 1.19
GMDS-203ENST00000467288 RXRAP19793 462 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 ITGB8P26012 769 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 TTLL4Q14679 1199 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 BADQ92934 168 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 RRP36Q96EU6 259 aaKnown RBP22.49■■□□□ 1.19
GMDS-203ENST00000467288 TMEM39AQ9NV64 488 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 GRIN2DO15399 1336 aa22.49■■□□□ 1.19
GMDS-203ENST00000467288 GCOM1H8Y6P7 765 aaPredicted RBP22.48■■□□□ 1.19
GMDS-203ENST00000467288 POLR2MP0CAP2 368 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 HOXA13P31271 388 aaPredicted RBP22.48■■□□□ 1.19
GMDS-203ENST00000467288 HSPA4P34932 840 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 CPT1AP50416 773 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 SHHQ15465 462 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 FAM126BQ8IXS8 530 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 FANCBQ8NB91 859 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 PIBF1Q8WXW3 757 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 COPS5Q92905 334 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 FAM161BQ96MY7 647 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 PDCD2LQ9BRP1 358 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 SEZ6LQ9BYH1 1024 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 POLR3EQ9NVU0 708 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 TBX21Q9UL17 535 aa22.48■■□□□ 1.19
GMDS-203ENST00000467288 EIF3JO75822 258 aaKnown RBP22.47■■□□□ 1.19
GMDS-203ENST00000467288 ITGA7Q13683 1181 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 C9orf50Q5SZB4 431 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 APOA5Q6Q788 366 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 SEPT14Q6ZU15 432 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 RAB11FIP4Q86YS3 637 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 GUCD1Q96NT3 240 aa22.47■■□□□ 1.19
GMDS-203ENST00000467288 A6NJR5 290 aa22.46■■□□□ 1.19
GMDS-203ENST00000467288 CD4P01730 458 aa22.46■■□□□ 1.19
GMDS-203ENST00000467288 HMGB1P09429 215 aaKnown RBP22.46■■□□□ 1.19
GMDS-203ENST00000467288 RAG1P15918 1043 aa22.46■■□□□ 1.19
GMDS-203ENST00000467288 PURAQ00577 322 aaKnown RBP22.46■■□□□ 1.19
GMDS-203ENST00000467288 SYNE3Q6ZMZ3 975 aa22.46■■□□□ 1.19
GMDS-203ENST00000467288 TMTC3Q6ZXV5 915 aa22.46■■□□□ 1.19
GMDS-203ENST00000467288 MICU3Q86XE3 530 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms