RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, human

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDEM3-204	ENST00000466392	ARIH2	O95376	493 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	GNAQ	P50148	359 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	ACLY	P53396	1101 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	GJA9	P57773	515 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	RTP1	P59025	263 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	ARHGEF16	Q5VV41	709 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	SLC39A5	Q6ZMH5	540 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	LZTS2	Q9BRK4	669 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	WDR11	Q9BZH6	1224 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	UPF3A	Q9H1J1	476 aa	Known RBP	13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	PXMP2	Q9NR77	195 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	ATP11B	Q9Y2G3	1177 aa		13.65	□□□□□ -0.22
EDEM3-204	ENST00000466392	DNAH12	Q6ZR08	3092 aa		13.65	□□□□□ -0.23
EDEM3-204	ENST00000466392	LTBP2	Q14767	1821 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	ASGR1	P07306	291 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	POLR2M	P0CAP2	368 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	MYCL	P12524	364 aa	Predicted RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	PSMA5	P28066	241 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	SMARCA1	P28370	1054 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	ADD1	P35611	737 aa	Known RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	GHRHR	Q02643	423 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	FUT2	Q10981	343 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	TOB2	Q14106	344 aa	Predicted RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	TRIM60	Q495X7	471 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	GNAS	Q5JWF2	1037 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	IQSEC1	Q6DN90	963 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	USP17L6P	Q6QN14	398 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	CHRDL2	Q6WN34	429 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	SEPT14	Q6ZU15	432 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	RUFY3	Q7L099	469 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	NSUN6	Q8TEA1	469 aa	Known RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	ZSWIM6	Q9HCJ5	1215 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	RBM28	Q9NW13	759 aa	Known RBP	13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	NR2E3	Q9Y5X4	410 aa		13.64	□□□□□ -0.23
EDEM3-204	ENST00000466392	RBM47	A0AV96	593 aa	Known RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	EPB41L2	O43491	1005 aa	Known RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	NR3C2	P08235	984 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	METAP2	P50579	478 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	CCT2	P78371	535 aa	Known RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	PGM5	Q15124	567 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	UBE2S	Q16763	222 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	DUSP28	Q4G0W2	176 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	WWC2	Q6AWC2	1192 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	TYW1B	Q6NUM6	668 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	HEATR3	Q7Z4Q2	680 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	MPHOSPH6	Q99547	160 aa	Known RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	PDCD2L	Q9BRP1	358 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	AGXT2	Q9BYV1	514 aa		13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	NCOA5	Q9HCD5	579 aa	Known RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	COLQ	Q9Y215	455 aa	Predicted RBP	13.63	□□□□□ -0.23
EDEM3-204	ENST00000466392	LOC102724159	A0A0B4J2E5	919 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	MEIS2	O14770	477 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	SORBS3	O60504	671 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	DTNB	O60941	627 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	TXN	P10599	105 aa	Known RBP	13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	CST5	P28325	142 aa	Predicted RBP	13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	PPP2R5B	Q15173	497 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	PWP2	Q15269	919 aa	Known RBP	13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	STXBP2	Q15833	593 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	FSCN1	Q16658	493 aa	Known RBP	13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	LY6K	Q17RY6	165 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	CXCL17	Q6UXB2	119 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	OR6J1	Q8NGC5	347 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	PPP1R13L	Q8WUF5	828 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	AP5M1	Q9H0R1	490 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	SPC25	Q9HBM1	224 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	STARD7	Q9NQZ5	370 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	CYP46A1	Q9Y6A2	500 aa		13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392		V9GY48	417 aa	Predicted RBP	13.62	□□□□□ -0.23
EDEM3-204	ENST00000466392	MOXD2P	A6NHM9	499 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	PQBP1	O60828	265 aa	Known RBP	13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	RGS20	O76081	388 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	PSMC6	P62333	389 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	TRAF1	Q13077	416 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	STK3	Q13188	491 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	SNX17	Q15036	470 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	SH3RF1	Q7Z6J0	888 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	SMARCC2	Q8TAQ2	1214 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	SCFD2	Q8WU76	684 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	PHKB	Q93100	1093 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	VTI1A	Q96AJ9	217 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	IWS1	Q96ST2	819 aa		13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	TSEN34	Q9BSV6	310 aa	Known RBP	13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.61	□□□□□ -0.23
EDEM3-204	ENST00000466392	NID2	Q14112	1375 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392		B4DLN1	442 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	ADAMTS3	O15072	1205 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	PDIA3	P30101	505 aa	Known RBP	13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	MRPL12	P52815	198 aa	Known RBP	13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	NKX3-2	P78367	333 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	MDM2	Q00987	491 aa	Predicted RBP	13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	TLE2	Q04725	743 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	C8orf34	Q49A92	452 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	CCDC62	Q6P9F0	684 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	FBXL16	Q8N461	479 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	PCSK9	Q8NBP7	692 aa	Known RBP	13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	PGBD1	Q96JS3	809 aa		13.6	□□□□□ -0.23
EDEM3-204	ENST00000466392	GLT1D1	Q96MS3	346 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms