RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 MCF2L2Q86YR7 1114 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 SRBD1Q8N5C6 995 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 BRF1Q92994 677 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 MTMR8Q96EF0 704 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 KATNBL1Q9H079 304 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 NRBP1Q9UHY1 535 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 ZMYND8Q9ULU4 1186 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 H0YGN5 161 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 OPLAHO14841 1288 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 CAPN2P17655 700 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 PSMA5P28066 241 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 PSEN1P49768 467 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 GNAQP50148 359 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 BEX3Q00994 111 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 TNFAIP2Q03169 654 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 FCHSD1Q86WN1 690 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 KCNB2Q92953 911 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 SPZ1Q9BXG8 430 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 USP26Q9BXU7 913 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
RTFDC1-205ENST00000466260 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 ADAMTS4O75173 837 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 COL6A1P12109 1028 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 MYCLP12524 364 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 SMPD1P17405 629 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 CDC27P30260 824 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 TMTC3Q6ZXV5 915 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 MAP3K14Q99558 947 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 SPC25Q9HBM1 224 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 VTA1Q9NP79 307 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
RTFDC1-205ENST00000466260 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 DYNC1LI2O43237 492 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 SORBS3O60504 671 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 DUSP11O75319 330 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 POLR2MP0CAP2 368 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 TAPT1Q6NXT6 567 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 RUFY3Q7L099 469 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 SMARCC2Q8TAQ2 1214 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 COPS5Q92905 334 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
RTFDC1-205ENST00000466260 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 B4DLN1 442 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 ASGR1P07306 291 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 HSD17B4P51659 736 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 RTP1P59025 263 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 TRAF1Q13077 416 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 STK3Q13188 491 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 PPP2R5BQ15173 497 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 KCNA10Q16322 511 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 UBE2SQ16763 222 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 MORC4Q8TE76 937 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 CUL5Q93034 780 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 AP5M1Q9H0R1 490 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 STARD7Q9NQZ5 370 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 CYP46A1Q9Y6A2 500 aa11.23□□□□□ -0.61
RTFDC1-205ENST00000466260 EPB41L2O43491 1005 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 ARIH2O95376 493 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 SEC24BO95487 1268 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 NR3C2P08235 984 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 EDNRBP24530 442 aa11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
RTFDC1-205ENST00000466260 ACLYP53396 1101 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms